Gene
RNA
| Item | Value |
|---|---|
| gene id | G2117830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 22261302 ~ 22261524 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pappalysin-2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2421660 | True | 223 | lncRNA | 0.51 | 1 | 22261302 | 22261524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cop1 | rfwd2 | coding | downstream | 48876 | 22202448 ~ 22212426 (-) |
| tnr | tnr | coding | downstream | 136001 | 21966295 ~ 22125301 (-) |
| LOC110508740 | kiaa0040 | coding | downstream | 312745 | 21942981 ~ 21948557 (-) |
| mrps14 | mrps14 | coding | downstream | 384593 | 21873216 ~ 21876709 (-) |
| LOC110508737 | cacybp | coding | downstream | 394267 | 21864614 ~ 21867035 (-) |
| astn1 | astn1 | coding | upstream | 25142 | 22286666 ~ 22527081 (-) |
| dars2 | dars2 | coding | upstream | 534115 | 22795639 ~ 22816743 (-) |
| LOC110508750 | LOC106569069 | coding | upstream | 560548 | 22822072 ~ 22828641 (-) |
| LOC110508754 | shcbp1l | coding | upstream | 672736 | 22934260 ~ 22939565 (-) |
| nmnat2 | nmnat2 | coding | upstream | 781014 | 23042538 ~ 23055346 (-) |
| G2117823 | NA | non-coding | downstream | 10897 | 22250192 ~ 22250405 (-) |
| G2117821 | pappa2 | non-coding | downstream | 12684 | 22248348 ~ 22248618 (-) |
| G2117807 | NA | non-coding | downstream | 21553 | 22239532 ~ 22239749 (-) |
| G2117798 | pappa2 | non-coding | downstream | 32914 | 22228142 ~ 22228388 (-) |
| G2117797 | pappa2 | non-coding | downstream | 33284 | 22227659 ~ 22228018 (-) |
| G2117840 | NA | non-coding | upstream | 16873 | 22278397 ~ 22280880 (-) |
| G2118030 | NA | non-coding | upstream | 283137 | 22544661 ~ 22544893 (-) |
| G2118194 | NA | non-coding | upstream | 324224 | 22585748 ~ 22601652 (-) |
| G2118250 | NA | non-coding | upstream | 413140 | 22674664 ~ 22674929 (-) |
| G2118251 | NA | non-coding | upstream | 415673 | 22677197 ~ 22677415 (-) |
| G2117313 | NA | other | downstream | 390249 | 21870685 ~ 21871053 (-) |
| G2115838 | NA | other | downstream | 1401772 | 20859140 ~ 20859530 (-) |
| LOC110508678 | LOC105024244 | other | downstream | 3139246 | 19116082 ~ 19185326 (-) |
| G2118200 | brinp2 | other | upstream | 333009 | 22594533 ~ 22607806 (-) |
| LOC110508185 | LOC106569033 | other | upstream | 1063477 | 23317575 ~ 23353162 (-) |
| LOC110508783 | LOC106599501 | other | upstream | 2403350 | 24664869 ~ 24677152 (-) |
| G2120836 | NA | other | upstream | 2469150 | 24730674 ~ 24734987 (-) |
| G2121444 | LOC106599515 | other | upstream | 2882538 | 25144062 ~ 25148520 (-) |
