Gene
RNA
| Item | Value |
|---|---|
| gene id | G2117840 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 22278397 ~ 22280880 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pappalysin-2 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2421673 | True | 657 | lncRNA | 0.38 | 2 | 22278397 | 22280880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cop1 | rfwd2 | coding | downstream | 65971 | 22202448 ~ 22212426 (-) |
| tnr | tnr | coding | downstream | 153096 | 21966295 ~ 22125301 (-) |
| LOC110508740 | kiaa0040 | coding | downstream | 329840 | 21942981 ~ 21948557 (-) |
| mrps14 | mrps14 | coding | downstream | 401688 | 21873216 ~ 21876709 (-) |
| LOC110508737 | cacybp | coding | downstream | 411362 | 21864614 ~ 21867035 (-) |
| astn1 | astn1 | coding | upstream | 5786 | 22286666 ~ 22527081 (-) |
| dars2 | dars2 | coding | upstream | 514759 | 22795639 ~ 22816743 (-) |
| LOC110508750 | LOC106569069 | coding | upstream | 541192 | 22822072 ~ 22828641 (-) |
| LOC110508754 | shcbp1l | coding | upstream | 653380 | 22934260 ~ 22939565 (-) |
| nmnat2 | nmnat2 | coding | upstream | 761658 | 23042538 ~ 23055346 (-) |
| G2117830 | NA | non-coding | downstream | 16873 | 22261302 ~ 22261524 (-) |
| G2117823 | NA | non-coding | downstream | 27992 | 22250192 ~ 22250405 (-) |
| G2117821 | pappa2 | non-coding | downstream | 29779 | 22248348 ~ 22248618 (-) |
| G2117807 | NA | non-coding | downstream | 38648 | 22239532 ~ 22239749 (-) |
| G2117798 | pappa2 | non-coding | downstream | 50009 | 22228142 ~ 22228388 (-) |
| G2118030 | NA | non-coding | upstream | 263781 | 22544661 ~ 22544893 (-) |
| G2118194 | NA | non-coding | upstream | 304868 | 22585748 ~ 22601652 (-) |
| G2118250 | NA | non-coding | upstream | 393784 | 22674664 ~ 22674929 (-) |
| G2118251 | NA | non-coding | upstream | 396317 | 22677197 ~ 22677415 (-) |
| G2118359 | NA | non-coding | upstream | 511539 | 22792419 ~ 22792756 (-) |
| G2117313 | NA | other | downstream | 407344 | 21870685 ~ 21871053 (-) |
| G2115838 | NA | other | downstream | 1418867 | 20859140 ~ 20859530 (-) |
| LOC110508678 | LOC105024244 | other | downstream | 3156341 | 19116082 ~ 19185326 (-) |
| G2118200 | brinp2 | other | upstream | 313653 | 22594533 ~ 22607806 (-) |
| LOC110508185 | LOC106569033 | other | upstream | 1044121 | 23317575 ~ 23353162 (-) |
| LOC110508783 | LOC106599501 | other | upstream | 2383994 | 24664869 ~ 24677152 (-) |
| G2120836 | NA | other | upstream | 2449794 | 24730674 ~ 24734987 (-) |
| G2121444 | LOC106599515 | other | upstream | 2863182 | 25144062 ~ 25148520 (-) |
