G2118333


Basic Information

Item Value
gene id G2118333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 22783689 ~ 22783894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2422182
actttattgtccccatggggaaattttgttacagtgtcatgtacacatttaaagtggcgtttaaatacaaaacaaattgacaatacaactttcataacagttacgtACCAATTAAAAGAGACTAGCCTGAGTTATTTAGGaaggatatcacacctggcacaaatgattgtctagGTCTGTTTTTCCTGGCAAtgggtgccctatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2422182 True 206 lncRNA 0.37 1 22783689 22783894

Neighbor

gene id symbol gene type direction distance location
LOC110508746 brinp2 coding upstream 119706 22547186 ~ 22663983 (+)
LOC118944815 NA coding upstream 394185 22385440 ~ 22389504 (+)
LOC118944814 NA coding upstream 400322 22378109 ~ 22383367 (+)
pappa2 pappa2 coding upstream 502795 22221394 ~ 22280894 (+)
tnn tnn coding upstream 853821 21891475 ~ 21930071 (+)
cenpl cenpl coding downstream 32979 22816873 ~ 22820125 (+)
ankrd45 ankrd45 coding downstream 44842 22828736 ~ 22830451 (+)
rasal2 NA coding downstream 47196 22831090 ~ 22913958 (+)
dhx9 dhx9 coding downstream 130762 22914656 ~ 22934260 (+)
lamc1 LOC106599430 coding downstream 157838 22941732 ~ 23022726 (+)
G2118330 NA non-coding upstream 1838 22781554 ~ 22781851 (+)
G2118128 NA non-coding upstream 113743 22669621 ~ 22669946 (+)
G2118024 NA non-coding upstream 243763 22539655 ~ 22539926 (+)
G2117660 NA non-coding upstream 427069 22356367 ~ 22356620 (+)
G2117603 NA non-coding upstream 519623 22263866 ~ 22264066 (+)
G2118342 NA non-coding downstream 7413 22791307 ~ 22791815 (+)
G2118532 NA non-coding downstream 293785 23077679 ~ 23201786 (+)
G2118550 NA non-coding downstream 330816 23114710 ~ 23117051 (+)
G2118530 NA non-coding downstream 344751 23128645 ~ 23159265 (+)
G2118573 NA non-coding downstream 376108 23160002 ~ 23162200 (+)
G2116347 NA other upstream 1408611 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 1941686 20840508 ~ 20842019 (+)
G2115369 NA other upstream 2341520 20441733 ~ 20442169 (+)
LOC110508695 LOC106599333 other upstream 3146936 19623468 ~ 19636825 (+)
G2113578 NA other upstream 3707271 19076077 ~ 19076418 (+)
smg7 smg7 other downstream 296522 23056778 ~ 23087821 (+)
LOC110508761 LOC106599440 other downstream 318515 23102409 ~ 23103987 (+)
G2118574 NA other downstream 379972 23163866 ~ 23164323 (+)
LOC110508774 LOC106599485 other downstream 1317263 24101070 ~ 24137027 (+)
G2121837 NA other downstream 2936546 25720440 ~ 25721674 (+)

Expression


Co-expression Network