G2118573



Basic Information


Item Value
gene id G2118573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 23160002 ~ 23162200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2422438
aaaataaaaaaaataaaaaaataactggTTTGGTCAATTAGTTTTGTGCATAGTTTAAAGGTATATCTTGCCAGTCTTAAAAGTTGTGTTTGCATTCTAGAAAGGGCTTCGACTCTCTAAAATAACTTTGTAGATCATGGCACAGCCATACCAGAGGCAGACCACCTAATATCAACTTTAATAAATAGTCATGCTGTTTATACCCTCAACTCAGGTCATCTGTTACTAGTATGGAAGAGTGGTTATTCAAGTGTTGAAAGAATGTTAATGCCATAAAAATAGAATctagattctatttctatggttaagGCCACACGCATGCCCTGTTTCCCCATTACAAAACATTGTTATTAGGCTACGGTTAAATCACCAAAACACTGTACACCATATCAGTAAAGAAATACATAGATTTCATACCACATCCAATGGACTTTTTTCACACAAGTGGTCTCTGAGCTGACTGACTATTGGGTCATAAAACCTGTTATAGTTCACAGTGCAAGGAACAACGAACAGACCAAAACAGTCCTTTCAGGGCATTTGTGTTGTTCTGCAATCAGATGTTTGTTCAGTGTGTTGTCAACAGGACAAGTACTTCATGTGAGTGGTtattcacatacagtatgagcttttttttttttacagaaccaATGTTTAATTTGTGAAATGCAGCACAAAAGACGCTTGTAAACAGTCTTCAGAGGCAGCAGTGAAGTGGGCTCGTCACATTTCTTGTACGAGGAAGTATTACTATTAGTCTGAAATGCAGCAACACATAGAAGCTCGTCTCATTCATTCAACATGAACCTCTCTTTTTGAATACAAGGTTTCCTcactttaaaaacattaacaaaatgtttgcaaatggcACTTTAATCAGAAGGGTCTTGTTGAAAACATTCCCTTCAGGTCTCTGTTAAAAGGGTGACGTGTCAAATTAGTGATGTCAGAGCAGAACTACAGtacaaaattaaataaaaatacatacagCAGAAGCAACATGAGGTATATATGTATTGCTCTGTTAAAGTAAAGGGTCCAAATTCAATAAATTAAGTTAAATtacataaaaaacaaaaacagtggTTAACCTAGATGCGGAGCGTGTGGCTGAGTTGCTGTGGTGCTGGGAGTGCTGGGTAATGTCGTTTCTGTCGGATGCGGAGATTCGTTTCACTCTTTCTCACCTCACCGTGGGCGCCAGTCATGCTTGGCATGTCATGACCCTTTGCTTCCCTGAGGTAATACTTTGGAGTTTGAGTCTTTGGTGGCAGGAGTCCTCTGTTCCTCTGAGGCCCTACTAGAGCTAGCCTCCTGCTTGTCCCTCCCCTCATTCCAGCCTTGCTTGTTCAGGCTCAGGTGGCTCATCATGGTCTGGGACAGCCGTGTGTCGGAGAAGCGTGACCATTCCACAAACAGAGGCTCTACCAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2422438 True 1431 lncRNA 0.40 2 23160002 23162200

Neighbor


gene id symbol gene type direction distance location
LOC110508761 LOC106599440 coding upstream 56015 23102409 ~ 23103987 (+)
smg7 smg7 coding upstream 72181 23056778 ~ 23087821 (+)
lamc2 lamc2 coding upstream 117590 23024773 ~ 23042412 (+)
lamc1 LOC106599430 coding upstream 137276 22941732 ~ 23022726 (+)
dhx9 dhx9 coding upstream 225742 22914656 ~ 22934260 (+)
LOC110508282 LOC106599615 coding downstream 34815 23197015 ~ 23204478 (+)
LOC100505418 LOC100505418 coding downstream 42707 23204907 ~ 23211267 (+)
LOC110508768 LOC106599453 coding downstream 100670 23262870 ~ 23286417 (+)
zmynd11 zmy11 coding downstream 590107 23752307 ~ 23776713 (+)
LOC110508774 LOC106599485 coding downstream 938870 24101070 ~ 24137027 (+)
G2118530 NA non-coding upstream 737 23128645 ~ 23159265 (+)
G2118550 NA non-coding upstream 42951 23114710 ~ 23117051 (+)
G2118342 NA non-coding upstream 368187 22791307 ~ 22791815 (+)
G2118333 NA non-coding upstream 376108 22783689 ~ 22783894 (+)
G2118330 NA non-coding upstream 378151 22781554 ~ 22781851 (+)
G2118577 NA non-coding downstream 6252 23168452 ~ 23169935 (+)
G2118658 NA non-coding downstream 139568 23301768 ~ 23355823 (+)
G2118712 NA non-coding downstream 274263 23436463 ~ 23457077 (+)
G2118881 NA non-coding downstream 490757 23652957 ~ 23653169 (+)
G2118942 NA non-coding downstream 582156 23744356 ~ 23744578 (+)
G2116347 NA other upstream 1784924 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 2317999 20840508 ~ 20842019 (+)
G2115369 NA other upstream 2717833 20441733 ~ 20442169 (+)
G2118574 NA other downstream 1666 23163866 ~ 23164323 (+)
G2121837 NA other downstream 2558240 25720440 ~ 25721674 (+)
G2122177 NA other downstream 3195338 26357538 ~ 26374560 (+)
LOC110508797 LOC106599544 other downstream 3517613 26679791 ~ 26688506 (+)

Expression



Co-expression Network