G2118577


Basic Information

Item Value
gene id G2118577
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 23168452 ~ 23169935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2422443
CTTGGCTTGACCTGTGAAGTCATCGTCAAGGATGTAGCCTAGAGGGTTGTTGGCTGGGATGCCGTGAAAGAACCGTGACGAGTGGAGGTACCTCTGAAAGCTCAGCAACCTTCGAACATTCCTGGCAGACACAGGCCGCGCAGCCTCAGGTCGGGCTATGGAAACAATGCAAAGTTCGGAAATCGACATACAAGTAGGGATGAGACCCTCTTCGCTCTGGTTCAAACCCCACCTGGCTTCTGAC

Function

NR:

description
high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2422443 True 244 lncRNA 0.54 2 23168452 23169935

Neighbor

gene id symbol gene type direction distance location
LOC110508761 LOC106599440 coding upstream 64465 23102409 ~ 23103987 (+)
smg7 smg7 coding upstream 80631 23056778 ~ 23087821 (+)
lamc2 lamc2 coding upstream 126040 23024773 ~ 23042412 (+)
lamc1 LOC106599430 coding upstream 145726 22941732 ~ 23022726 (+)
dhx9 dhx9 coding upstream 234192 22914656 ~ 22934260 (+)
LOC110508282 LOC106599615 coding downstream 27080 23197015 ~ 23204478 (+)
LOC100505418 LOC100505418 coding downstream 34972 23204907 ~ 23211267 (+)
LOC110508768 LOC106599453 coding downstream 92935 23262870 ~ 23286417 (+)
zmynd11 zmy11 coding downstream 582372 23752307 ~ 23776713 (+)
LOC110508774 LOC106599485 coding downstream 931135 24101070 ~ 24137027 (+)
G2118573 NA non-coding upstream 6252 23160002 ~ 23162200 (+)
G2118530 NA non-coding upstream 9187 23128645 ~ 23159265 (+)
G2118550 NA non-coding upstream 51401 23114710 ~ 23117051 (+)
G2118342 NA non-coding upstream 376637 22791307 ~ 22791815 (+)
G2118333 NA non-coding upstream 384558 22783689 ~ 22783894 (+)
G2118658 NA non-coding downstream 131833 23301768 ~ 23355823 (+)
G2118712 NA non-coding downstream 266528 23436463 ~ 23457077 (+)
G2118881 NA non-coding downstream 483022 23652957 ~ 23653169 (+)
G2118942 NA non-coding downstream 574421 23744356 ~ 23744578 (+)
G2118953 NA non-coding downstream 593677 23763612 ~ 23764826 (+)
G2118574 NA other upstream 4129 23163866 ~ 23164323 (+)
G2116347 NA other upstream 1793374 21374495 ~ 21375078 (+)
LOC110508722 LOC106569260 other upstream 2326449 20840508 ~ 20842019 (+)
G2121837 NA other downstream 2550505 25720440 ~ 25721674 (+)
G2122177 NA other downstream 3187603 26357538 ~ 26374560 (+)
LOC110508797 LOC106599544 other downstream 3509878 26679791 ~ 26688506 (+)
G2123101 NA other downstream 3772265 26942200 ~ 26945187 (+)

Expression


Co-expression Network