G2121361


Basic Information

Item Value
gene id G2121361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 25004416 ~ 25014010 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2425544
accctggtcagatattgtggcctcactggtctgttggttgggtttaccctggtcagatagtgtggcctcactggtctgttggttgggtttaccctggtcagatagtgtggtctcactggcctgttggttgggtttaccctggtcagatagtgtggcctcactggcctgttggttgagtttaccctggtcagatagtgtggtctcactggtctgttggttgggtttaccctggtcagatagtgtggcctcactggcctgttggttgggtttaccctggtcagatagtgtggcctcactggcctgttggttgggtttaccctggtcagatagtgttgtctcactggtctgttggttggcctGGTTGCCTGTCCTCTCAAAACATGCCCTGACAAGCACCAAGCGAACAGAGTTCAGAAATAAAATGTTAACCTTTAAC
>TU2425545
cctgttggttggcctgttggttgggtttaccctggtcagagagtgtggcctcactggtctgttggttggcctgttggtcgggtttaccctggtcagatagtgtggtctcactggtctgttggttgggtttaccctggtcagatagtgtggcctcactggcctgttggttgggtttaccctggtcagatagtgtggcctcactggcctgttggttgggtttaccctggtcagatagtgttgtctcactggtctgttggttggcctGGTTGCCTGTCCTCTCAAAACATGCCCTGACAAGCACCAAGCGAACAGAGTTCAGAAATAAAATGTTAACCTTTAAC

Function

NR:

description
uncharacterized protein LOC110523079

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2425544 False 436 lncRNA 0.51 2 25004416 25014010
TU2425545 True 341 lncRNA 0.52 2 25004416 25010336

Neighbor

gene id symbol gene type direction distance location
LOC110508783 LOC106599501 coding downstream 327264 24664869 ~ 24677152 (-)
LOC110508781 LOC105017795 coding downstream 346549 24628922 ~ 24657867 (-)
LOC110508780 NA coding downstream 377266 24623953 ~ 24627150 (-)
LOC118944874 NA coding downstream 457020 24545663 ~ 24547396 (-)
LOC118944850 NA coding downstream 514090 24487395 ~ 24490326 (-)
LOC110508788 LOC106599520 coding upstream 201332 25215342 ~ 25232530 (-)
LOC110508789 LOC106599527 coding upstream 330440 25344450 ~ 25412332 (-)
LOC110508791 LOC106568850 coding upstream 668308 25677135 ~ 26069268 (-)
LOC110508193 LOC106599530 coding upstream 1116417 26130427 ~ 26266904 (-)
LOC110508194 LOC106599532 coding upstream 1281764 26295774 ~ 26558418 (-)
G2120993 NA non-coding downstream 53468 24950530 ~ 24950948 (-)
G2120982 NA non-coding downstream 63161 24940881 ~ 24941255 (-)
G2120928 NA non-coding downstream 139211 24863091 ~ 24865205 (-)
G2120929 NA non-coding downstream 140420 24863627 ~ 24863996 (-)
G2121395 LOC106599513 non-coding upstream 90044 25104054 ~ 25108200 (-)
G2121417 NA non-coding upstream 103499 25117509 ~ 25117732 (-)
G2121441 NA non-coding upstream 142167 25156177 ~ 25157733 (-)
G2121438 NA non-coding upstream 187904 25201914 ~ 25203317 (-)
G2121436 NA non-coding upstream 195078 25209088 ~ 25212487 (-)
G2120836 NA other downstream 269429 24730674 ~ 24734987 (-)
LOC110508185 LOC106569033 other downstream 1674801 23317575 ~ 23353162 (-)
G2118200 brinp2 other downstream 2396610 22594533 ~ 22607806 (-)
LOC110508740 kiaa0040 other downstream 3056158 21942981 ~ 21948557 (-)
G2121444 LOC106599515 other upstream 130052 25144062 ~ 25148520 (-)
G2121457 NA other upstream 184238 25198248 ~ 25274626 (-)
G2122515 NA other upstream 932723 25946733 ~ 25950453 (-)
G2125203 LOC106599130 other upstream 3530931 28544941 ~ 28551514 (-)

Expression


Co-expression Network