G2121441


Basic Information

Item Value
gene id G2121441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 25156177 ~ 25157733 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2425632
gaaaatttcagggatcttttatttcagctcatgaaacatgggaccaacactttacacatAGCATTaatattttagttcagtatagttcatagatcaataagaaagagttccaatcctctcttcctttccccaCTTTGACCACTCCCAGACAATAACAAtttttgcttgagaaattgctcttcgcTAAGAAGCTTTTTATTTGTTTTTgatcattttaattgaaaacaatcacttaattgttacccagaaatgattggatattgagataaaaacagctgcattggacctttaactgtAGAACATGTGGGTAGCATAAGATGGGCAGTGAGTAGAAAGCTGGATTCCCTGAACATTCCCTGGACATAGTAACCTTGGATACATTCCACTGGATTCTCTCTAACAGTAAGACAAAGCAAGGACACATTAAACAATAATTAACACACACGCATGCAGCATGTAGCAATGTTAGGGTAATTTGTATTGGAACTTTATTTAATAAATTATTTTAGAAATAAAGTATTGCAAAATGTGAatttgatgaaataaaaatacccTTTAAAAACAAAGAGCATGGCGTGTTCTTACAACTAAGTGGGATGTTTGAACTTTTACAAAGATCTGACTGACGTCATTCCCATAACACTGATGTTTATAACTGAAATGTAATTACAATTATTCAACGGAAGACGAGTTTGATCAAACCATCAAATTAGAAATGGATTAAGGTGAGAATGATTTGACAGCAAAAAAAACATTCAGAACCCCATTCAGAATTACATTTCTGTAACTGAAACAAAACACTTAAAACGAGAAGGCAGTGAGTTATGTCATATTTGGCATTGTTATTAATGAGGAGTTTAATAGGGACCTGAGTCTTCTTTAAAACAAAAAAATTTAAACCTGAAACCCATAATACCACTACTGTACTTGATGTAATTTCATTTATAAAGATTCACAAATATCGTGACAACCCCCAAAAATGATTAAACTGATTGTTCAGGTTGAAGAAAGTCATTGAAAAGAAACATACCTTTGCTTCCAGACTTTTTCTATCACTAAAATATGGCTTAGACAGAATCCATTGCCTACAAACTGTACACATAACAATTTATTGCTGTCCCAATGGTCAGCTATCGCTACATATCTTGTCCAATATCGACATCCAATTTCACTCTCAAAACAGAAAGAATGGCTCCACAGTTCTTTGAAAGGCACAACCTCACCTTCAATGACCCTACCAATCCAGTGGCAAAAATTCAGTTTTAAAGGATTCTCTCAAGTTCCACAAACAAGTTAAAACCCAAGTTTATACATACTGTACAATTCAAACAATGCATAGAAAAAGCAGTTAGTAAAACATACTGAAATAGTGGCTAAATGCCCTGCTATTATTTGGCAACTAAAAAAACAAAGTGAACATAAAAACACCCCTCCTTCCATATTCTTTtgcatacagtgttgtaatgacaGAGGAAGCTCCATCATTTGCCCTCGTATTTTGGATTGAAAACAGTTGTTACGGCACTCTTGTAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2425632 True 1536 lncRNA 0.34 2 25156177 25157733

Neighbor

gene id symbol gene type direction distance location
LOC110508783 LOC106599501 coding downstream 479025 24664869 ~ 24677152 (-)
LOC110508781 LOC105017795 coding downstream 498310 24628922 ~ 24657867 (-)
LOC110508780 NA coding downstream 529027 24623953 ~ 24627150 (-)
LOC118944874 NA coding downstream 608781 24545663 ~ 24547396 (-)
LOC118944850 NA coding downstream 665851 24487395 ~ 24490326 (-)
LOC110508788 LOC106599520 coding upstream 57609 25215342 ~ 25232530 (-)
LOC110508789 LOC106599527 coding upstream 186717 25344450 ~ 25412332 (-)
LOC110508791 LOC106568850 coding upstream 524585 25677135 ~ 26069268 (-)
LOC110508193 LOC106599530 coding upstream 972694 26130427 ~ 26266904 (-)
LOC110508194 LOC106599532 coding upstream 1138041 26295774 ~ 26558418 (-)
G2121417 NA non-coding downstream 38445 25117509 ~ 25117732 (-)
G2121395 LOC106599513 non-coding downstream 47977 25104054 ~ 25108200 (-)
G2121361 NA non-coding downstream 142167 25004416 ~ 25014010 (-)
G2120993 NA non-coding downstream 205229 24950530 ~ 24950948 (-)
G2120982 NA non-coding downstream 214922 24940881 ~ 24941255 (-)
G2121438 NA non-coding upstream 44181 25201914 ~ 25203317 (-)
G2121436 NA non-coding upstream 51355 25209088 ~ 25212487 (-)
G2121549 NA non-coding upstream 171709 25329442 ~ 25330859 (-)
G2121580 NA non-coding upstream 239879 25397612 ~ 25397848 (-)
G2121599 NA non-coding upstream 264395 25422128 ~ 25422360 (-)
G2121444 LOC106599515 other downstream 7657 25144062 ~ 25148520 (-)
G2120836 NA other downstream 421190 24730674 ~ 24734987 (-)
LOC110508185 LOC106569033 other downstream 1826562 23317575 ~ 23353162 (-)
G2118200 brinp2 other downstream 2548371 22594533 ~ 22607806 (-)
G2121457 NA other upstream 40515 25198248 ~ 25274626 (-)
G2122515 NA other upstream 789000 25946733 ~ 25950453 (-)
G2125203 LOC106599130 other upstream 3387208 28544941 ~ 28551514 (-)
G2125253 NA other upstream 3469322 28627055 ~ 28685735 (-)

Expression


Co-expression Network