G2121457


Basic Information

Item Value
gene id G2121457
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 25198248 ~ 25274626 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2425648
tggggaagggtaccaaaacatttctgcagcattgaaggtccccaagaacacagtggcctccatcattcttaaatggaagaagtttggaaccaccaagactcttcctagagctggccgcccggccaaactgagcaatcaggggagatgggccttggtcaagaacccgatggccactaacagagctccagagttcctctgtggagatggaagaaccttccagaaggacaaccatgcaacaatccctgcagcactccaccaatcaggccttaaatggtagtgtggccagacagaagccactcctctgtaaaaggcacatgacagcctctcagaccatgagaaacaagattctctggtctgatgaaaccaagattggactttttggcctgaatgccaagcgtcatgtctggaggaaatctggcaccgctcatcacctggacaattccatccctatggtgaagcatggtggtggcagcatcatgctgtggggatgttcttcagcggcagggactgggagactagtcaggatcgaggtaaagcttaacagagcaaagtacagagagatccttgatgaaaacctgctccagagcgctcaggaccggggtgaggttcaccttccaacaggacaatgaccctaagcacacagtcaagaccatgcagggacaagtctctgaatgtccttgagtggcccagccagaggccggacttgaac

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2425648 True 709 TUCP 0.52 3 25198248 25274626

Neighbor

gene id symbol gene type direction distance location
LOC110508783 LOC106599501 coding downstream 521096 24664869 ~ 24677152 (-)
LOC110508781 LOC105017795 coding downstream 540381 24628922 ~ 24657867 (-)
LOC110508780 NA coding downstream 571098 24623953 ~ 24627150 (-)
LOC118944874 NA coding downstream 650852 24545663 ~ 24547396 (-)
LOC118944850 NA coding downstream 707922 24487395 ~ 24490326 (-)
LOC110508789 LOC106599527 coding upstream 69824 25344450 ~ 25412332 (-)
LOC110508791 LOC106568850 coding upstream 407692 25677135 ~ 26069268 (-)
LOC110508193 LOC106599530 coding upstream 855801 26130427 ~ 26266904 (-)
LOC110508194 LOC106599532 coding upstream 1021148 26295774 ~ 26558418 (-)
trnam-cau-2 NA coding upstream 1285621 26560247 ~ 26560319 (-)
G2121441 NA non-coding downstream 40515 25156177 ~ 25157733 (-)
G2121417 NA non-coding downstream 80516 25117509 ~ 25117732 (-)
G2121395 LOC106599513 non-coding downstream 90048 25104054 ~ 25108200 (-)
G2121361 NA non-coding downstream 184238 25004416 ~ 25014010 (-)
G2120993 NA non-coding downstream 247300 24950530 ~ 24950948 (-)
G2121549 NA non-coding upstream 54816 25329442 ~ 25330859 (-)
G2121580 NA non-coding upstream 122986 25397612 ~ 25397848 (-)
G2121599 NA non-coding upstream 147502 25422128 ~ 25422360 (-)
G2121610 NA non-coding upstream 167467 25442093 ~ 25442306 (-)
G2121641 NA non-coding upstream 204925 25479551 ~ 25479841 (-)
G2121444 LOC106599515 other downstream 49728 25144062 ~ 25148520 (-)
G2120836 NA other downstream 463261 24730674 ~ 24734987 (-)
LOC110508185 LOC106569033 other downstream 1868633 23317575 ~ 23353162 (-)
G2118200 brinp2 other downstream 2590442 22594533 ~ 22607806 (-)
G2122515 NA other upstream 672107 25946733 ~ 25950453 (-)
G2125203 LOC106599130 other upstream 3270315 28544941 ~ 28551514 (-)
G2125253 NA other upstream 3352429 28627055 ~ 28685735 (-)
G2125270 agla other upstream 3388082 28662708 ~ 28663426 (-)

Expression


Co-expression Network