Gene
RNA
| Item | Value |
|---|---|
| gene id | G2122763 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 26387090 ~ 26387289 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2427084 | True | 200 | lncRNA | 0.38 | 1 | 26387090 | 26387289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508193 | LOC106599530 | coding | downstream | 120186 | 26130427 ~ 26266904 (-) |
| LOC110508791 | LOC106568850 | coding | downstream | 317822 | 25677135 ~ 26069268 (-) |
| LOC110508789 | LOC106599527 | coding | downstream | 974758 | 25344450 ~ 25412332 (-) |
| LOC110508788 | LOC106599520 | coding | downstream | 1154560 | 25215342 ~ 25232530 (-) |
| LOC110508783 | LOC106599501 | coding | downstream | 1709938 | 24664869 ~ 24677152 (-) |
| trnam-cau-2 | NA | coding | upstream | 172958 | 26560247 ~ 26560319 (-) |
| trnag-ucc-234 | NA | coding | upstream | 173591 | 26560880 ~ 26560951 (-) |
| trnag-ucc-235 | NA | coding | upstream | 176303 | 26563592 ~ 26563663 (-) |
| trnag-ucc-236 | NA | coding | upstream | 178199 | 26565488 ~ 26565559 (-) |
| trnag-ucc-237 | NA | coding | upstream | 180911 | 26568200 ~ 26568271 (-) |
| G2122762 | NA | non-coding | downstream | 146 | 26386742 ~ 26386944 (-) |
| G2122757 | NA | non-coding | downstream | 10493 | 26376301 ~ 26376597 (-) |
| LOC110508194 | LOC106599532 | non-coding | downstream | 90482 | 26295774 ~ 26558418 (-) |
| G2122709 | NA | non-coding | downstream | 104729 | 26281995 ~ 26282361 (-) |
| G2122701 | NA | non-coding | downstream | 124589 | 26262130 ~ 26262501 (-) |
| G2122764 | NA | non-coding | upstream | 129 | 26387418 ~ 26387699 (-) |
| G2122765 | NA | non-coding | upstream | 3961 | 26391250 ~ 26392143 (-) |
| G2122767 | LOC106581475 | non-coding | upstream | 7893 | 26395182 ~ 26395533 (-) |
| G2122773 | NA | non-coding | upstream | 24471 | 26411760 ~ 26411967 (-) |
| G2122774 | NA | non-coding | upstream | 26178 | 26413467 ~ 26414008 (-) |
| G2122515 | NA | other | downstream | 436637 | 25946733 ~ 25950453 (-) |
| G2121457 | NA | other | downstream | 1112464 | 25198248 ~ 25274626 (-) |
| G2121444 | LOC106599515 | other | downstream | 1238570 | 25144062 ~ 25148520 (-) |
| G2120836 | NA | other | downstream | 1652103 | 24730674 ~ 24734987 (-) |
| G2125203 | LOC106599130 | other | upstream | 2157652 | 28544941 ~ 28551514 (-) |
| G2125253 | NA | other | upstream | 2239766 | 28627055 ~ 28685735 (-) |
| G2125270 | agla | other | upstream | 2275419 | 28662708 ~ 28663426 (-) |
| G2125290 | NA | other | upstream | 2304850 | 28692139 ~ 28692470 (-) |
| G2125723 | NA | other | upstream | 2498179 | 28885468 ~ 28885854 (-) |
