G2122986


Basic Information

Item Value
gene id G2122986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 26685725 ~ 26688170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2427344
cacattcccagtgggtcagaagtttacatacactcaattagtttttggtagcattgtctttaaattgtttaacttgggtcaaacgtttcgggtagccttccacaagcttcccacaataagtggggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtctttaggcctccttgctcgcacaggctttttcagttctgctcacacattctctataggattgaggtcagggctttgtgatggccactccaataccttgactttattatccttaagccattctgccacaacattggaagtatacttggggtcattgtccatttttaagactcatttgcgaccaaactttaacttcctgactgacgtcttgggatgttgcttcaatatatctacataatttaacttcctcatgatgccatctattttgtgaagtgcaccagtccctcctgcaggaaagcacccccacaacatgatgctgccacccccatgcttcacggttgggatggtgttcttcggcttgcaagtctccccctttttcctccaaacataacgatggtcattatggccaaacctttctatttttgtttcatcagaccagaggacatttctccaaaaagtacaatctttgtccccatgtgcagttgcaaaccgtagtcttgcttttttatggcagttttggagcaatggcttcttccttgctgagcggcctttcaggttatgtcgatataggccttgttttactgtggatatagatacttttgtacctgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcactttttgcaccaatgtacgttcatctccaggagacagaacgcgtctccttcctgagcggtatgatggctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaacgtggtatcttcaggcatttggaaattgctcccaaggatgaaccagacttgtggaggtctacaatttttttttgatgtcttggcagatttctttagattttcccatgatgtcaagcaaagaggcactgagtttcaaggtaggccttgaaatacatccacgggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttacaagctatTTAAataacagtcaacttagtgtatgtaaacttctgaccaactggtcaaaacatattgatacaacagtagctaagctggggagaagtctgtccataatgaaGCACTGTTTttccttcttaacagcactatcaacaaggcaggcaggtcctacaggcactagttttgtcacacctggactactgttcagtcgtgtggtcaggtgccacaattGCAATTGGCTTAGAACAGgtcagcacagctggcccttggatgtacagagagagcaatactttctgaaggcatagtttgtgtacatgtgttttATCGTAACCACAGCGACATTCAACATGCGCACAGACAAATTAGGTTTTCTCCGTATGCCGTCAGAAACTAGTGGTGTGCTGTCTTAGCCTACATCCCTCATCTGATGACAAAGTTTCATGAGTCCCTTCTCagaacatacagtacacacatagaTGGCACTGCACAAGGCACAAACAATTGTGATCAAATGGAACATTTCCAAGAAAATTTTGTTTGAATTGCTTCAGcactttaaaagtattttgtggtAGTCAAAGAAGTTAAAAACTTTTTACTTAAGCGAAgcagtgaaatatagtgaaagtTAAATATATTAAAACCCCTGGTCTCCTAGGGTGAACTCTTGTCCGAGGTAAGGCTGCAGAAGGTCAAAAGGAAAAATTGGGCCAAAATGCATAGGTTTTCAATAATAAATACTCCTAATTCCTACTCAACGTACCTTGTCCTCAAACAGTGGCAGAATTTTTCACACAGCTAGTAAGAtttcacacacacagtaatttctcagtgggcaaaactggttgaaacataatttaaaccagCTCGGCTCAGTGTTTTTCCCTCCATGGGTCTTGTCAGAGCTCTGAGGTGCTGGTGGTGGCTCTTCTCTGGCTGCTAGACCTGGACCTCCTGAAGGTGAAGGTCTGCTTGGAGGTCCTCACTTCCCTGGTGATGAAGTAGTAACACAGAGCATCCAGACAACACGTGATGTTGGCCAGACTCATGGCCACCTGCAGGAACAGGCTGATATTCGTCTTGGCCATGCAGTCCTGGATCACGTCTTGACGTACCTGGGAGGAGATAGTATTCCTGTAAGGCTTAGAGTTTTTCGTGGTCAAGTCACATGGCCAGGGGAAAAAACGTTGTCCCAGACATATTAATGCACATAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2427344 True 2399 lncRNA 0.43 2 26685725 26688170

Neighbor

gene id symbol gene type direction distance location
trnap-agg-158 NA coding downstream 59173 26626481 ~ 26626552 (-)
trnai-aau-86 NA coding downstream 60725 26624927 ~ 26625000 (-)
trnam-cau-4 NA coding downstream 66361 26619292 ~ 26619364 (-)
trnam-cau-3 NA coding downstream 69243 26616410 ~ 26616482 (-)
trnag-ucc-258 NA coding downstream 70592 26615062 ~ 26615133 (-)
LOC110508799 LOC106599547 coding upstream 7289 26695459 ~ 26702918 (-)
LOC110508801 LOC106599551 coding upstream 26423 26714593 ~ 26741871 (-)
thpo NA coding upstream 68928 26757098 ~ 26763629 (-)
LOC110508805 LOC106599556 coding upstream 149772 26837942 ~ 26842853 (-)
LOC118944878 NA coding upstream 224758 26912928 ~ 26920425 (-)
G2122858 NA non-coding downstream 61290 26624215 ~ 26624435 (-)
G2122847 NA non-coding downstream 71617 26613795 ~ 26614108 (-)
G2122841 NA non-coding downstream 132168 26553340 ~ 26553557 (-)
G2122836 NA non-coding downstream 142780 26542286 ~ 26542945 (-)
G2122834 NA non-coding downstream 147266 26538250 ~ 26538459 (-)
G2122987 NA non-coding upstream 1324 26689494 ~ 26689708 (-)
G2122989 NA non-coding upstream 4831 26693001 ~ 26693251 (-)
G2122977 NA non-coding upstream 23985 26712155 ~ 26712929 (-)
G2123004 NA non-coding upstream 32108 26720278 ~ 26722193 (-)
LOC110508791 LOC106568850 other downstream 616516 25677135 ~ 26069268 (-)
G2122515 NA other downstream 735272 25946733 ~ 25950453 (-)
G2121457 NA other downstream 1411099 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 1537205 25144062 ~ 25148520 (-)
G2120836 NA other downstream 1950738 24730674 ~ 24734987 (-)
G2125203 LOC106599130 other upstream 1856771 28544941 ~ 28551514 (-)
G2125253 NA other upstream 1938885 28627055 ~ 28685735 (-)
G2125270 agla other upstream 1974538 28662708 ~ 28663426 (-)
G2125290 NA other upstream 2003969 28692139 ~ 28692470 (-)
G2125723 NA other upstream 2197298 28885468 ~ 28885854 (-)

Expression


Co-expression Network