Gene
RNA
| Item | Value |
|---|---|
| gene id | G2122921 |
| gene name | LOC106599551 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 26735992 ~ 26736575 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| period circadian protein homolog 2-like isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2427261 | True | 494 | lncRNA | 0.57 | 2 | 26735992 | 26736575 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508800 | LOC106599548 | coding | upstream | 26424 | 26707377 ~ 26709568 (+) |
| LOC110508797 | LOC106599544 | coding | upstream | 49184 | 26679791 ~ 26688506 (+) |
| LOC110508796 | LOC106599541 | coding | upstream | 60311 | 26656615 ~ 26675681 (+) |
| LOC110508795 | LOC106599535 | coding | upstream | 79882 | 26628352 ~ 26656110 (+) |
| trnaw-cca-61 | NA | coding | upstream | 110679 | 26625242 ~ 26625313 (+) |
| LOC110508195 | LOC106599554 | coding | downstream | 46350 | 26782925 ~ 26909897 (+) |
| LOC110508806 | LOC106570393 | coding | downstream | 108459 | 26845034 ~ 26845490 (+) |
| xrn1 | LOC106599575 | coding | downstream | 332470 | 27069045 ~ 27136729 (+) |
| LOC110508820 | rab2a | coding | downstream | 594224 | 27330799 ~ 27345830 (+) |
| LOC110508821 | chd7 | coding | downstream | 611529 | 27348104 ~ 27454444 (+) |
| G2122903 | NA | non-coding | upstream | 22601 | 26712825 ~ 26713391 (+) |
| G2122902 | NA | non-coding | upstream | 23283 | 26712433 ~ 26712709 (+) |
| G2122898 | NA | non-coding | upstream | 31004 | 26704770 ~ 26704988 (+) |
| G2122897 | NA | non-coding | upstream | 31292 | 26704288 ~ 26704700 (+) |
| G2122853 | NA | non-coding | upstream | 116103 | 26619666 ~ 26619889 (+) |
| G2123026 | NA | non-coding | downstream | 38402 | 26774977 ~ 26812815 (+) |
| G2123096 | NA | non-coding | downstream | 181543 | 26918118 ~ 26918536 (+) |
| G2123099 | LOC100194703 | non-coding | downstream | 186286 | 26922861 ~ 26923286 (+) |
| G2123110 | NA | non-coding | downstream | 212513 | 26949088 ~ 26949338 (+) |
| G2122177 | NA | other | upstream | 361432 | 26357538 ~ 26374560 (+) |
| G2121837 | NA | other | upstream | 1014318 | 25720440 ~ 25721674 (+) |
| LOC110508774 | LOC106599485 | other | upstream | 2625282 | 24101070 ~ 24137027 (+) |
| G2118574 | NA | other | upstream | 3571669 | 23163866 ~ 23164323 (+) |
| G2123101 | NA | other | downstream | 205625 | 26942200 ~ 26945187 (+) |
| G2123174 | NA | other | downstream | 364737 | 27101312 ~ 27104270 (+) |
| G2123170 | NA | other | downstream | 369459 | 27106034 ~ 27109282 (+) |
| LOC110508827 | LOC106599210 | other | downstream | 984025 | 27720549 ~ 27725061 (+) |
| LOC110508851 | LOC106599130 | other | downstream | 1785652 | 28522217 ~ 28551515 (+) |
