G2123026


Basic Information

Item Value
gene id G2123026
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 26774977 ~ 26812815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2427391
cccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgccctttgccgttataggacgcagactgtgagggctgctaataagcgtagaactaagagtcctagatattgtcgcggtcagagagtttggctctccactcagaaccttccccttaagacggcttctcgcaagttgaccccgcggttcattggtccgttccgtatttctcgggtcattaatcctgtcgcagtgcgacttcttcttccgcgatatcttcgtcgcgtccacccggtcttccatgtctcctgtgttaagcccgttcttcgcgcccccgc

Function

NR:

description
PREDICTED: glycine receptor subunit alpha-3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2427391 True 333 lncRNA 0.56 2 26774977 26812815

Neighbor

gene id symbol gene type direction distance location
LOC110508800 LOC106599548 coding upstream 65409 26707377 ~ 26709568 (+)
LOC110508797 LOC106599544 coding upstream 88169 26679791 ~ 26688506 (+)
LOC110508796 LOC106599541 coding upstream 99296 26656615 ~ 26675681 (+)
LOC110508795 LOC106599535 coding upstream 118867 26628352 ~ 26656110 (+)
trnaw-cca-61 NA coding upstream 149664 26625242 ~ 26625313 (+)
LOC110508806 LOC106570393 coding downstream 32219 26845034 ~ 26845490 (+)
xrn1 LOC106599575 coding downstream 256230 27069045 ~ 27136729 (+)
LOC110508820 rab2a coding downstream 517984 27330799 ~ 27345830 (+)
LOC110508821 chd7 coding downstream 535289 27348104 ~ 27454444 (+)
LOC110508826 LOC106599160 coding downstream 819661 27632476 ~ 27674752 (+)
G2122910 NA non-coding upstream 25816 26721205 ~ 26749161 (+)
G2122921 LOC106599551 non-coding upstream 38402 26735992 ~ 26736575 (+)
G2122903 NA non-coding upstream 61586 26712825 ~ 26713391 (+)
G2122902 NA non-coding upstream 62268 26712433 ~ 26712709 (+)
G2122898 NA non-coding upstream 69989 26704770 ~ 26704988 (+)
LOC110508195 LOC106599554 non-coding downstream 66529 26782925 ~ 26909897 (+)
G2123096 NA non-coding downstream 105303 26918118 ~ 26918536 (+)
G2123099 LOC100194703 non-coding downstream 110046 26922861 ~ 26923286 (+)
G2123110 NA non-coding downstream 136273 26949088 ~ 26949338 (+)
G2123109 NA non-coding downstream 136852 26949667 ~ 26950517 (+)
G2122177 NA other upstream 400417 26357538 ~ 26374560 (+)
G2121837 NA other upstream 1053303 25720440 ~ 25721674 (+)
LOC110508774 LOC106599485 other upstream 2664267 24101070 ~ 24137027 (+)
G2118574 NA other upstream 3610654 23163866 ~ 23164323 (+)
G2123101 NA other downstream 129385 26942200 ~ 26945187 (+)
G2123174 NA other downstream 288497 27101312 ~ 27104270 (+)
G2123170 NA other downstream 293219 27106034 ~ 27109282 (+)
LOC110508827 LOC106599210 other downstream 907785 27720549 ~ 27725061 (+)
LOC110508851 LOC106599130 other downstream 1709412 28522217 ~ 28551515 (+)

Expression


Co-expression Network