Gene
RNA
| Item | Value |
|---|---|
| gene id | G2123334 |
| gene name | LOC106599575 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 27092853 ~ 27093157 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 5'-3' exoribonuclease 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2427764 | True | 229 | lncRNA | 0.52 | 2 | 27092853 | 27093157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r7 | ppp1r7 | coding | downstream | 37037 | 27051258 ~ 27055816 (-) |
| LOC110508807 | LOC106599567 | coding | downstream | 46372 | 27033696 ~ 27046481 (-) |
| tfa | LOC100136298 | coding | downstream | 94460 | 26974438 ~ 26998393 (-) |
| LOC110508196 | LOC100380746 | coding | downstream | 119542 | 26925269 ~ 26973311 (-) |
| LOC118944898 | NA | coding | downstream | 164446 | 26928284 ~ 26928407 (-) |
| tox | LOC106599578 | coding | upstream | 48387 | 27141544 ~ 27243306 (-) |
| LOC110508819 | LOC106599582 | coding | upstream | 210588 | 27303745 ~ 27316749 (-) |
| LOC110508822 | LOC106599166 | coding | upstream | 383866 | 27477023 ~ 27501636 (-) |
| LOC110508824 | LOC106599165 | coding | upstream | 419044 | 27512201 ~ 27517367 (-) |
| LOC110508198 | LOC106599164 | coding | upstream | 425218 | 27518375 ~ 27561560 (-) |
| G2123309 | NA | non-coding | downstream | 16966 | 27023890 ~ 27075887 (-) |
| G2123290 | NA | non-coding | downstream | 155384 | 26936445 ~ 26937469 (-) |
| G2123281 | NA | non-coding | downstream | 171158 | 26921406 ~ 26921695 (-) |
| LOC118944878 | NA | non-coding | downstream | 175639 | 26912928 ~ 26920425 (-) |
| G2123275 | NA | non-coding | downstream | 180790 | 26911759 ~ 26912063 (-) |
| G2123349 | NA | non-coding | upstream | 46785 | 27139942 ~ 27140186 (-) |
| G2123449 | NA | non-coding | upstream | 122621 | 27215778 ~ 27216140 (-) |
| G2123495 | NA | non-coding | upstream | 172338 | 27265495 ~ 27265695 (-) |
| G2123505 | NA | non-coding | upstream | 180795 | 27273952 ~ 27274192 (-) |
| LOC110508791 | LOC106568850 | other | downstream | 1023644 | 25677135 ~ 26069268 (-) |
| G2122515 | NA | other | downstream | 1142400 | 25946733 ~ 25950453 (-) |
| G2121457 | NA | other | downstream | 1818227 | 25198248 ~ 25274626 (-) |
| G2121444 | LOC106599515 | other | downstream | 1944333 | 25144062 ~ 25148520 (-) |
| G2120836 | NA | other | downstream | 2357866 | 24730674 ~ 24734987 (-) |
| G2125203 | LOC106599130 | other | upstream | 1451784 | 28544941 ~ 28551514 (-) |
| G2125253 | NA | other | upstream | 1533898 | 28627055 ~ 28685735 (-) |
| G2125270 | agla | other | upstream | 1569551 | 28662708 ~ 28663426 (-) |
| G2125290 | NA | other | upstream | 1598982 | 28692139 ~ 28692470 (-) |
| G2125723 | NA | other | upstream | 1792311 | 28885468 ~ 28885854 (-) |
