G2124236


Basic Information

Item Value
gene id G2124236
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 27406992 ~ 27410682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2428762
CAAACCCCACTCAGTCACACAcaaccactcacatacacacccccctctctctacaccccccctctctctacactcCCCCACTCCACACACCCCCGTACATAGccccccactcacacacacacacacagctacctctctctcacacacacacacagctacctctctctcacacacacacacagctacctctcacacacacacacagctacctctcacacacctacctcacacacacacacacctacctcacacacacctacctcacacacacctacctcacacacacacacacacacacacacacctacctcacacacacacacctacctcacacacacacacacacctacctcagacacacacacacctacctcacacacacacacacctacctcacacacacacctacctcacacacacacctacctcacacacacacctacctcacacacacacacacacacacacaccaacctactcacacacacacctacctacctacctcacacacacacacctaccacacacacacaccacacacacctacctcacacacacacacctacctcacacacacaccaacctactcacacacacacacctacctacctacctcacacacacctacctacctcac
>TU2428763
cacacacacctacctcacacaccctcacacacacacctacctcacacacacacctacacacagctacctctctctcacacacacacacagctacctctcacacacacacacagctacctctcacacacctacctcacacacacacacacctacctcacacacacctacctcacacacacctacctcacacacacacacacacacacacacacctacctcacacacacacacctacctcacacacacacacacacctacctcagacacacacacacctacctcacacacacacacacctacctcacacacacacctacctcacacacacacctacctcacacacacacctacctcacacacacacacacacacacacaccaacctactcacacacacacctacctacctacctcacacacacacacctaccacacacacacaccacacacacctacctcacacacacacacctacctcacacacacaccaacctactcacacacacacacctacctacctacctcacacacacctacctacctcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2428762 False 637 lncRNA 0.54 3 27406992 27410682
TU2428763 True 545 lncRNA 0.52 2 27406992 27408451

Neighbor

gene id symbol gene type direction distance location
LOC110508819 LOC106599582 coding downstream 90243 27303745 ~ 27316749 (-)
tox LOC106599578 coding downstream 163686 27141544 ~ 27243306 (-)
ppp1r7 ppp1r7 coding downstream 351176 27051258 ~ 27055816 (-)
LOC110508807 LOC106599567 coding downstream 360511 27033696 ~ 27046481 (-)
tfa LOC100136298 coding downstream 408599 26974438 ~ 26998393 (-)
LOC110508822 LOC106599166 coding upstream 66341 27477023 ~ 27501636 (-)
LOC110508824 LOC106599165 coding upstream 101519 27512201 ~ 27517367 (-)
LOC110508198 LOC106599164 coding upstream 107693 27518375 ~ 27561560 (-)
LOC110508825 LOC106599162 coding upstream 181089 27591771 ~ 27595809 (-)
LOC110508831 LOC106599206 coding upstream 422678 27833360 ~ 27837602 (-)
G2124233 NA non-coding downstream 3870 27402280 ~ 27403122 (-)
G2124230 NA non-coding downstream 12622 27393594 ~ 27394370 (-)
G2124191 NA non-coding downstream 61235 27343776 ~ 27345757 (-)
G2124169 NA non-coding downstream 106483 27300281 ~ 27300509 (-)
G2124168 NA non-coding downstream 107172 27299520 ~ 27299820 (-)
G2124257 NA non-coding upstream 25987 27436669 ~ 27437199 (-)
G2124266 NA non-coding upstream 48810 27459492 ~ 27459757 (-)
G2124268 NA non-coding upstream 49719 27460401 ~ 27460663 (-)
G2124278 NA non-coding upstream 60839 27471521 ~ 27471753 (-)
G2124290 NA non-coding upstream 98391 27509073 ~ 27509351 (-)
LOC110508791 LOC106568850 other downstream 1337783 25677135 ~ 26069268 (-)
G2122515 NA other downstream 1456539 25946733 ~ 25950453 (-)
G2121457 NA other downstream 2132366 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 2258472 25144062 ~ 25148520 (-)
G2120836 NA other downstream 2672005 24730674 ~ 24734987 (-)
G2125203 LOC106599130 other upstream 1134259 28544941 ~ 28551514 (-)
G2125253 NA other upstream 1216373 28627055 ~ 28685735 (-)
G2125270 agla other upstream 1252026 28662708 ~ 28663426 (-)
G2125290 NA other upstream 1281457 28692139 ~ 28692470 (-)
G2125723 NA other upstream 1474786 28885468 ~ 28885854 (-)

Expression


Co-expression Network