G2124520


Basic Information

Item Value
gene id G2124520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 27943375 ~ 27944688 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2429089
TAATTTCCCAAATAAGATTCCAAATATCTACAAAAACAATAAGGGGGAACAAATGCAATAGGCTACATTAGGAAGTATGCGGTTACTGTGCAAGACAAAATACAACAGTGAAAACTCACAATGGAGTAAACGTCTGACTTGGCTACAGTAGTTCATGGCTGAATGTCAATTGAATTAGAGGTTGGTGAATGAATTTGGCCTTGGTGAGGTTATAGATGATACTTCTACCTAATAGTATGTCAGTATGTGACTGCATTTAGTTAGCAAATGGACATTGAATGAATGGGAAACTATCGCTATGCATGTCAAGGTTGAGTAGGATTTACATGGAGTACATATTCACTCAATGTGAATtaagaaaacaaaaacacacaagctTCAATCAATTAGACTTCATCTGTGATATTTGGTGGAGAAACAGACAATTAAATGCATACTTACAAGAAATAGGTTAGTTTTGACACACTGGTTCACTGCCTTAATTAATAAGGCGGTAAACCAGTGAGTCAAAATCTAataagttaaataaaaaacataaaataaaaaatgtcacagATTTTGCAGTAAAATCTAAATGACTTCTTCACCGCCCCTTCTCTCAACATTACTTTGaggcctgactgactggatggtaAAGAGAAATGACGCATAATCCCTCCCCAGGCTCAACGGAAGATTCACCCCAATGAGAAAGTCAGTCCTCTAAAGTTCATCCTTTATAGAGtctgtttcctcctcttcttcctctgctccagtctcttcttcttcttcttcttcttcttcacggTCCTCtaactcttcctccttctcttcttcctcctcgtcTTCAGGCTCGTCTTTTGTCTGCTCtttcctccccatctcttccgCCTCTAGTTTCTtcctctcctgttcctcctgGGACACCTTCATCTTTTTCTCTGGATCCTTAGTCTGACCCCAGGTCTCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2429089 True 952 lncRNA 0.39 2 27943375 27944688

Neighbor

gene id symbol gene type direction distance location
LOC110508837 LOC106599149 coding downstream 5563 27933209 ~ 27937812 (-)
mrpl37 mrpl37 coding downstream 13279 27923767 ~ 27930096 (-)
LOC110508834 LOC106599151 coding downstream 18993 27909214 ~ 27924382 (-)
LOC110508831 LOC106599206 coding downstream 105773 27833360 ~ 27837602 (-)
LOC110508825 LOC106599162 coding downstream 347566 27591771 ~ 27595809 (-)
LOC110508841 LOC106599142 coding upstream 20198 27964886 ~ 27984136 (-)
LOC110508843 LOC106599203 coding upstream 54373 27999061 ~ 28002198 (-)
LOC118944862 LOC106599141 coding upstream 100162 28044850 ~ 28068458 (-)
LOC110508200 NA coding upstream 249188 28193876 ~ 28367209 (-)
LOC110508849 NA coding upstream 453817 28398505 ~ 28403893 (-)
G2124521 NA non-coding downstream 1428 27941117 ~ 27941947 (-)
G2124408 NA non-coding downstream 198366 27740633 ~ 27745009 (-)
G2124352 NA non-coding downstream 298120 27617358 ~ 27645255 (-)
G2124335 NA non-coding downstream 356454 27586698 ~ 27586921 (-)
G2124325 NA non-coding downstream 372800 27569649 ~ 27570575 (-)
G2124562 NA non-coding upstream 49711 27994399 ~ 27994967 (-)
G2124567 NA non-coding upstream 52589 27997277 ~ 27998017 (-)
G2124618 NA non-coding upstream 140428 28085116 ~ 28086921 (-)
G2124663 NA non-coding upstream 197066 28141754 ~ 28141985 (-)
G2124826 NA non-coding upstream 419508 28364196 ~ 28364426 (-)
LOC110508791 LOC106568850 other downstream 1874166 25677135 ~ 26069268 (-)
G2122515 NA other downstream 1992922 25946733 ~ 25950453 (-)
G2121457 NA other downstream 2668749 25198248 ~ 25274626 (-)
G2121444 LOC106599515 other downstream 2794855 25144062 ~ 25148520 (-)
G2120836 NA other downstream 3208388 24730674 ~ 24734987 (-)
G2125203 LOC106599130 other upstream 600253 28544941 ~ 28551514 (-)
G2125253 NA other upstream 682367 28627055 ~ 28685735 (-)
G2125270 agla other upstream 718020 28662708 ~ 28663426 (-)
G2125290 NA other upstream 747451 28692139 ~ 28692470 (-)
G2125723 NA other upstream 940780 28885468 ~ 28885854 (-)

Expression


Co-expression Network