Gene
RNA
| Item | Value |
|---|---|
| gene id | G2124885 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 28408342 ~ 28408842 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2429502 | True | 501 | lncRNA | 0.42 | 1 | 28408342 | 28408842 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508848 | LOC106599136 | coding | upstream | 238032 | 28160483 ~ 28170310 (+) |
| rwdd3 | rwdd3 | coding | upstream | 295765 | 28105364 ~ 28113908 (+) |
| LOC110508846 | LOC106599140 | coding | upstream | 304432 | 28090839 ~ 28103910 (+) |
| LOC110508844 | tm56b | coding | upstream | 321147 | 28079201 ~ 28087195 (+) |
| LOC110508842 | LOC106599146 | coding | upstream | 409931 | 27984309 ~ 27998411 (+) |
| LOC110508851 | LOC106599130 | coding | downstream | 113375 | 28522217 ~ 28551515 (+) |
| palmda | LOC106599129 | coding | downstream | 184142 | 28592984 ~ 28609915 (+) |
| LOC110508852 | LOC106599122 | coding | downstream | 202647 | 28611489 ~ 28622256 (+) |
| LOC110508853 | LOC106599119 | coding | downstream | 231296 | 28640138 ~ 28649444 (+) |
| agla | LOC106599117 | coding | downstream | 245530 | 28654372 ~ 28685734 (+) |
| G2124862 | NA | non-coding | upstream | 19109 | 28389022 ~ 28389233 (+) |
| G2124851 | NA | non-coding | upstream | 25335 | 28382740 ~ 28383007 (+) |
| G2124039 | NA | non-coding | upstream | 259141 | 28148999 ~ 28149201 (+) |
| G2124038 | NA | non-coding | upstream | 260886 | 28147155 ~ 28147456 (+) |
| G2124012 | NA | non-coding | upstream | 293601 | 28114374 ~ 28114741 (+) |
| G2124929 | NA | non-coding | downstream | 44130 | 28452972 ~ 28453396 (+) |
| G2124933 | NA | non-coding | downstream | 46566 | 28455408 ~ 28455639 (+) |
| G2124936 | NA | non-coding | downstream | 48250 | 28457092 ~ 28457389 (+) |
| G2124937 | NA | non-coding | downstream | 53398 | 28462240 ~ 28462570 (+) |
| G2124938 | NA | non-coding | downstream | 54687 | 28463529 ~ 28465780 (+) |
| LOC110508827 | LOC106599210 | other | upstream | 684354 | 27720549 ~ 27725061 (+) |
| G2123170 | NA | other | upstream | 1299060 | 27106034 ~ 27109282 (+) |
| G2123174 | NA | other | upstream | 1304072 | 27101312 ~ 27104270 (+) |
| G2123101 | NA | other | upstream | 1463155 | 26942200 ~ 26945187 (+) |
| LOC110508797 | LOC106599544 | other | upstream | 1719836 | 26679791 ~ 26688506 (+) |
| LOC110508880 | NA | other | downstream | 861943 | 29270737 ~ 29274454 (+) |
| G2125614 | LOC106599059 | other | downstream | 911901 | 29320743 ~ 29323384 (+) |
| G2126497 | NA | other | downstream | 1801405 | 30210247 ~ 30211633 (+) |
| kcnn1a | LOC106598974 | other | downstream | 2126009 | 30534338 ~ 30592397 (+) |
