G2125810 (LOC106599085)


Basic Information

Item Value
gene id G2125810
gene name LOC106599085
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29076054 ~ 29076542 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430559
GGGATCCATAGGCTCCTTCGCTTCTTTCTTATCACACCTCTCCAGGTAGCAGTCCAGGCTGTCCGAACGCAGCATGTTCCAACACCCTTCACTCTCGTCCCTGTCCTCGTCTACAGAATCCACAGAAGCCAGTCTTGACTTACTCTGGGGCCCTGAGAGGGTGGCATTCGCAGGGGGTTCATCCTTCAAACGTACAAAAGACGAGAGTATGGGCATTGTAGTCTGAGTGCCCACAGTAGACTGAGTGCTCACCCTATTCAGAACCAGAGTCTCTGGGCGTGCTACCCTCCAAAATCCTTTAGGAGGTGCCCAGTGTCTGTGAGAGGAgttagaagaggtggaggaggatgcAGGAGCGGGCTTTGAAGAAGGAGGGGGGTCCTCCTTGGTTGCGCTGGTGCTGTCTGACTGGATGTTCTCCAAGCTCTCCAAGCTGGCCCCCTCCCCCAAACCGCGAGGCTGCCCCGGCACACTCCCAGCGgggcctcc

Function

NR:

description
uncharacterized protein LOC110508869

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430559 True 489 lncRNA 0.57 1 29076054 29076542

Neighbor

gene id symbol gene type direction distance location
LOC110508868 LOC106599087 coding downstream 2309 29045566 ~ 29073745 (-)
LOC110508867 LOC106599198 coding downstream 47159 29026008 ~ 29028895 (-)
LOC110508212 LOC106599092 coding downstream 72817 28983099 ~ 29003237 (-)
LOC110508862 LOC106599098 coding downstream 174815 28893815 ~ 28901239 (-)
LOC110508863 LOC106599199 coding downstream 213684 28860725 ~ 28862370 (-)
LOC118944842 NA coding upstream 43842 29118684 ~ 29123806 (-)
LOC110508284 LOC106598767 coding upstream 61610 29138152 ~ 29141013 (-)
LOC110508873 LOC106599192 coding upstream 118056 29194598 ~ 29199181 (-)
LOC110508876 NA coding upstream 124046 29200588 ~ 29203038 (-)
LOC110508874 LOC106599072 coding upstream 127022 29203564 ~ 29220510 (-)
G2125808 NA non-coding downstream 941 29074777 ~ 29075113 (-)
G2125796 NA non-coding downstream 33591 29042219 ~ 29042463 (-)
G2125789 NA non-coding downstream 46085 29029677 ~ 29029969 (-)
G2125745 NA non-coding downstream 84990 28932659 ~ 28991064 (-)
G2125811 NA non-coding upstream 12 29076554 ~ 29076799 (-)
G2125812 NA non-coding upstream 604 29077146 ~ 29077512 (-)
G2125814 NA non-coding upstream 2208 29078750 ~ 29079026 (-)
G2125815 NA non-coding upstream 2987 29079529 ~ 29080258 (-)
G2125817 NA non-coding upstream 4029 29080571 ~ 29081546 (-)
G2125723 NA other downstream 190200 28885468 ~ 28885854 (-)
G2125290 NA other downstream 383584 28692139 ~ 28692470 (-)
G2125253 NA other downstream 390319 28627055 ~ 28685735 (-)
G2125270 agla other downstream 412628 28662708 ~ 28663426 (-)
G2125203 LOC106599130 other downstream 524540 28544941 ~ 28551514 (-)
G2125813 NA other upstream 1497 29078039 ~ 29078744 (-)
LOC110508917 LOC106598978 other upstream 1324671 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1357893 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1477047 30553589 ~ 30555187 (-)

Expression


Co-expression Network