G2125817


Basic Information

Item Value
gene id G2125817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29080571 ~ 29081546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430566
gtcagaggccgagcaattgccgtaccaggcagtgatgcactcgatgttgcagctgtagaaccttttgaggatctgaggacccatgccaaatctttttttgtttcttgagggggaaaaggctttgtcgtgccctcttcacgactgtattggtgtgtttggaccattctagtttgttgttgatgtggacaccaaggaacttgaagctctcaacctgctccactacagccctgtcgatgagaatgggggcgtgctcggtacTCCTTTTCcggtagtccacaataatctccttagtcttggctacgttgagggataggttgttaatctggcaccacccggccaggtctctgacctcctccctgtctcatcgttgtcggtgatcaggcctaccactgttgtgtcgtctgcaaacttaatgatggttttggagtcgtgcctggccagtataaacaccatgggaccacacagccgtcacacggctcaggaaggagaaacattctgtctcctagagatgaacgtactttggtgcaaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtaaagatgctggaggaaacaggtacaaaaatatctctatccacagtaaaacgagtcctatattgacataacctgaaaggccgctcagcaaggaagaagccacttctccaaatcCACCATAAAAAgctagactacagtttgcaactgcacatggggacaaagatggtagtttttggagaaatgtcctctggtctgatgaaacaaaaaataactgtttggccataatgaccatcattatgtttggaggaaaaagggggaggcttgcaagccgaagaacaccatcccaaccatgaagcacaccatcccaaccatgaagcacgggggtggcagcatcatgttgtgggggtgctttgctgcaggagggactggtgcacttcataaaatagatggtatcatgaggcaggaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430566 True 976 lncRNA 0.48 1 29080571 29081546

Neighbor

gene id symbol gene type direction distance location
LOC110508868 LOC106599087 coding downstream 6826 29045566 ~ 29073745 (-)
LOC110508867 LOC106599198 coding downstream 51676 29026008 ~ 29028895 (-)
LOC110508212 LOC106599092 coding downstream 77334 28983099 ~ 29003237 (-)
LOC110508862 LOC106599098 coding downstream 179332 28893815 ~ 28901239 (-)
LOC110508863 LOC106599199 coding downstream 218201 28860725 ~ 28862370 (-)
LOC118944842 NA coding upstream 38838 29118684 ~ 29123806 (-)
LOC110508284 LOC106598767 coding upstream 56606 29138152 ~ 29141013 (-)
LOC110508873 LOC106599192 coding upstream 113052 29194598 ~ 29199181 (-)
LOC110508876 NA coding upstream 119042 29200588 ~ 29203038 (-)
LOC110508874 LOC106599072 coding upstream 122018 29203564 ~ 29220510 (-)
G2125815 NA non-coding downstream 313 29079529 ~ 29080258 (-)
G2125814 NA non-coding downstream 1545 29078750 ~ 29079026 (-)
G2125812 NA non-coding downstream 3059 29077146 ~ 29077512 (-)
G2125811 NA non-coding downstream 3772 29076554 ~ 29076799 (-)
G2125810 LOC106599085 non-coding downstream 4029 29076054 ~ 29076542 (-)
G2125860 NA non-coding upstream 73683 29155229 ~ 29159013 (-)
G2125875 NA non-coding upstream 95107 29176653 ~ 29274480 (-)
G2125903 NA non-coding upstream 130400 29211946 ~ 29212438 (-)
G2125888 NA non-coding upstream 216260 29297806 ~ 29298278 (-)
G2125887 NA non-coding upstream 216973 29298519 ~ 29299176 (-)
G2125813 NA other downstream 1827 29078039 ~ 29078744 (-)
G2125723 NA other downstream 194717 28885468 ~ 28885854 (-)
G2125290 NA other downstream 388101 28692139 ~ 28692470 (-)
G2125253 NA other downstream 394836 28627055 ~ 28685735 (-)
LOC110508917 LOC106598978 other upstream 1319667 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1352889 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1472043 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1623539 30705085 ~ 30706591 (-)

Expression


Co-expression Network