G2125860


Basic Information

Item Value
gene id G2125860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29155229 ~ 29159013 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430611
agtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtcctGATGTttccatagtctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatggcTACtttactgacgttaccatagtctactgtactgatgttaccataggctactgtactgatggctactgtactgacgttaccatagtctactgtactgatgttaccataggctactgtactgatggctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatggctactgtactgacgttaccatagtctactgtactgatgttaccataggctactgtactgatggctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccataggctactgtactgatggctactgtactgatgttaccatagtctactgtactgacgttaccatagtatactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtcctgatgttaccatagtctactgtactgacgttaccatagtctactgtactgatggctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccatagtctactgtactgacgttaccatagtctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtcctgatgttaccatagtctactgtactgacgttaccatagtctactgtactgatggctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgaaTACTGTCctgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatggctactttactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccataggctactgtactgatggctactgtactgacgttaccataggctactgtcctgatggctactgtactgacgttaccatagtctactgtactgacgttaccataggctactgtactgacgttaccatagtctactgtactgatgttaccatagtctactgtactgatgttaccatagtctactgtactgacgttaccataggctactgtactgacgttaccatagtctactgtactgatgttaccataggctactgtactgacgttaccataggctactttaggggttcccaaactttttcactctgggtcccccttccagcattggggaacatgtAGCGCCCCCCGTGCGTGCATG

Function

NR:

description
Ice nucleation protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430611 True 2282 lncRNA 0.41 3 29155229 29159013

Neighbor

gene id symbol gene type direction distance location
LOC110508284 LOC106598767 coding downstream 14216 29138152 ~ 29141013 (-)
LOC118944842 NA coding downstream 31423 29118684 ~ 29123806 (-)
LOC110508868 LOC106599087 coding downstream 81484 29045566 ~ 29073745 (-)
LOC110508867 LOC106599198 coding downstream 126334 29026008 ~ 29028895 (-)
LOC110508212 LOC106599092 coding downstream 151992 28983099 ~ 29003237 (-)
LOC110508873 LOC106599192 coding upstream 35585 29194598 ~ 29199181 (-)
LOC110508876 NA coding upstream 41575 29200588 ~ 29203038 (-)
LOC110508874 LOC106599072 coding upstream 44551 29203564 ~ 29220510 (-)
LOC110508877 NA coding upstream 69829 29228842 ~ 29239200 (-)
LOC110508879 LOC106599070 coding upstream 105816 29264829 ~ 29269523 (-)
G2125817 NA non-coding downstream 73683 29080571 ~ 29081546 (-)
G2125815 NA non-coding downstream 74971 29079529 ~ 29080258 (-)
G2125814 NA non-coding downstream 76203 29078750 ~ 29079026 (-)
G2125812 NA non-coding downstream 77717 29077146 ~ 29077512 (-)
G2125811 NA non-coding downstream 78430 29076554 ~ 29076799 (-)
G2125875 NA non-coding upstream 17640 29176653 ~ 29274480 (-)
G2125903 NA non-coding upstream 52933 29211946 ~ 29212438 (-)
G2125888 NA non-coding upstream 138793 29297806 ~ 29298278 (-)
G2125887 NA non-coding upstream 139506 29298519 ~ 29299176 (-)
G2125937 NA non-coding upstream 157141 29316154 ~ 29316379 (-)
G2125813 NA other downstream 76485 29078039 ~ 29078744 (-)
G2125723 NA other downstream 269375 28885468 ~ 28885854 (-)
G2125290 NA other downstream 462759 28692139 ~ 28692470 (-)
G2125253 NA other downstream 469494 28627055 ~ 28685735 (-)
LOC110508917 LOC106598978 other upstream 1242200 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1275422 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1394576 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1546072 30705085 ~ 30706591 (-)
G2128216 NA other upstream 2085078 31244091 ~ 31244692 (-)

Expression


Co-expression Network