G2125875


Basic Information

Item Value
gene id G2125875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29176653 ~ 29274480 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430643
GTATCTTACATAAGAAAAGCACAAAATAATGTACCAATTATCATATTTTATTAATTTCGCTCTTACATTGCCAGCATACTTTATGCACAGTAAAATAACCAGGTTGACATTTTCATCCAGCCCTTAATATTTACTTCTAAACACTGGTTTAGTGAAGATAATGACATTTTATCCAGTAATCTTGAGCCTTGAACTGTTTCCGTAAACATGAGGACAGGACGTCAGATCAACTACCAAAGCTTGAAGATGTCCTTATCTTACTTTTACTGATCCATATTCAACTGACTGTGGATCAGTTGACAATCCCAAAGCCGCAAGAATAGGCAGGGCCAATCAATAgatacaaaatatttaaaaagtagATGAGGACTAGACCGCAAAAAACAATAGGACTGCTTATCATTACGTACCACTAATTTCTACCAAAACCATATAGTTTGCCCAACTTCTTAAACCAACGGCTTTGAGCATTCCATTTGTAAGACAAGTTTTTTAATTATAGACAATCAGGAACTCTTTGATTATAAGGtgtcatgtaaatgcatcataatgcCATAACTTCAATGTCCTAACTttctaaatacatggctctggttTCTACCATTTAGTTGTTCTTTTGGCATGAGTATTATATCCAGCTTCAAATCTTGTGCTAAGATTTGTGTTGCTGAATTTCTTTCCAGTCTGACCAAGGCATTTGGCCATTCTACCAAACAGAAAACATGTTCAAAGCAAAACAGAACATTTCTTTCAATACACTAAATTAAAGTAGAAATTATAGTTCATTTTACACACTGAAATTACAACAAAGTGGTGGCAAATAAGACTTCTAGAAAGGACCACCAAAAACAGAGCTCACAATTCCACAAGATGGCCAACTTGCCTGAGATTGACAGAGCACATCACCTTATTATTTCAGAAACCCCACTATTGGAATGCAGCTTGATGGCTTTTTGTTGTGTGCTGAAAATTGTTAACCTCTATCATTTAAGGCACAAGGTAGGAATGACTTGACAGAGCTTGCCAAAAGTAACCAGAGACAAATAACAAAGGTCGaacaaaataatacaaattaaGAACAGAAAGTCACAAAGTGCAAGACAGTGGCTCATCGTCCTTGGCCTAGCTGTGTGCAACTTAAGAAGACTGAGAATGTTGAGTGAAGGATAATGGGACGTCATCAAGCTGAGAGAGGTGGTACTTGGTTGGGCGGATACTGAGTGGAATGAACGGGGTGGACATTTCATCCTACATGCCCATCCGAATGCTCTGAATGATCTGGAAGatagctAACAATTCCAAAGGTGtttagatgaaagagagagaaataaagaaataacACATTTTTGCTTGGTTCTCAGTTGCTGCCTGTAGCCTTCAGGCCTAGTATTACATTTAAACTAACTGGTCATATTCAGTTGCAACACAATCTTACACTCAATTAGtgcaaatatgtacaaaaagtatttcagcaaattttgtgtgtttttgtgtggctTAATAATTAGtgtgaaaatacaaaaaaaaatgtgtgacTTAATTCGTAGCAAAAGATACATTTTTCGACTTCATTCATAGGAAAAAATTTTAGGGGCAAACTTAGGAAAAATATTTTGAAAGTTATTGGAGCAGTGCATTTGGGGCAGTGGTGTTCCACACTGCTTATTTTTGTcacacatttatatatatatatatatatatatatataaaaaacgtTAACAACCCAATATTGTTAATCGACCAGGTTATCACTGAAATACTTATAATAAAATAGTAGcattatgttt
>TU2430644
GTATCTTACATAAGAAAAGCACAAAATAATGTACCAATTATCATATTTTATTAATTTCGCTCTTACATTGCCAGCATACTTTATGCACAGTAAAATAACCAGGTTGACATTTTCATCCAGCCCTTAATATTTACTTCTAAACACTGGTTTAGTGAAGATAATGACATTTTATCCAGTAATCTTGAGCCTTGAACTGTTTCCGTAAACATGAGGACAGGACGTCAGATCAACTACCAAAGCTTGAAGATGTCCTTATCTTACTTTTACTGATCCATATTCAACTGACTGTGGATCAGTTGACAATCCCAAAGCCGCAAGAATAGGCAGGGCCAATCAATAgatacaaaatatttaaaaagtagATGAGGACTAGACCGCAAAAAACAATAGGACTGCTTATCATTACGTACCACTAATTTCTACCAAAACCATATAGTTTGCCCAACTTCTTAAACCAACGGCTTTGAGCATTCCATTTGTAAGACAAGTTTTTTAATTATAGACAATCAGGAACTCTTTGATTATAAGGtgtcatgtaaatgcatcataatgcCATAACTTCAATGTCCTAACTttctaaatacatggctctggttTCTACCATTTAGTTGTTCTTTTGGCATGAGTATTATATCCAGCTTCAAATCTTGTGCTAAGATTTGTGTTGCTGAATTTCTTTCCAGTCTGACCAAGGCATTTGGCCATTCTACCAAACAGAAAACATGTTCAAAGCAAAACAGAACATTTCTTTCAATACACTAAATTAAAGTAGAAATTATAGTTCATTTTACACACTGAAATTACAACAAAGTGGTGGCAAATAAGACTTCTAGAAAGGACCACCAAAAACAGAGCTCACAATTCCACAAGATGGCCAACTTGCCTGAGATTGACAGAGCACATCACCTTATTATTTCAGAAACCCCACTATTGGAATGCAGCTTGATGGCTTTTTGTTGTGTGCTGAAAATTGTTAACCTCTATCATTTAAGGCACAAGGTAGGAATGACTTGACAGAGCTTGCCAAAAGTAACCAGAGACAAATAACAAAGGTCGaacaaaataatacaaattaaGAACAGAAAGTCACAAAGTGCAAGACAGTGGCTCATCGTCCTTGGCCTAGCTGTGTGCAACTTAAGAAGACTGAGAATGTTGAGTGAAGGATAATGGGACGTCATCAAGCTGAGAGAGGTGGTACTTGGTTGGGCGGATACTGAGTGGAATGAACGGGGTGGACATTTCATCCTACATGCCCATCCGAATGCTCTGAATGATCTGGAAGatagCTGATCCACACACAACAAAGATGAAGAGGGCCAACAGCCATGGTCCCACAGCCACCTTATCATCTTGAGGGTTTCTCGTAGATTTGGCTACGTTGCCTCTTTGCGTGATATTCTTGCTGTGTTTTTCGTTGGCCATACGAATCCTCTGTTTGGCGACCATCTTCCAAATAAGTAGGTTATGAATTATTTTACAAAAATGTGGAATGTTAGTTATATGGTTAATCTGGCTCACTGGTATGCAGTTGGCACTCGTCTACTCTACAGTACAAAATGTTTCAAAAGGGAGAATAAAAGCAGGGCAAATGTCTACGTATGCAAAGTCTTAAGCCCGC

Function

NR:

description
PREDICTED: stress-associated endoplasmic reticulum protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430643 False 1787 lncRNA 0.35 2 29176653 29274480
TU2430644 True 1621 lncRNA 0.38 3 29270785 29274480

Neighbor

gene id symbol gene type direction distance location
LOC110508284 LOC106598767 coding downstream 35640 29138152 ~ 29141013 (-)
LOC118944842 NA coding downstream 52847 29118684 ~ 29123806 (-)
LOC110508868 LOC106599087 coding downstream 102908 29045566 ~ 29073745 (-)
LOC110508867 LOC106599198 coding downstream 147758 29026008 ~ 29028895 (-)
LOC110508212 LOC106599092 coding downstream 173416 28983099 ~ 29003237 (-)
LOC110508881 ap2m1 coding upstream 9436 29283916 ~ 29293425 (-)
LOC110508883 LOC106599063 coding upstream 26170 29300650 ~ 29315173 (-)
LOC110508885 LOC106599059 coding upstream 46257 29320737 ~ 29330605 (-)
copb2 LOC106599054 coding upstream 56621 29331101 ~ 29346369 (-)
LOC110508887 LOC106599048 coding upstream 81171 29355651 ~ 29360875 (-)
G2125860 NA non-coding downstream 17640 29155229 ~ 29159013 (-)
G2125817 NA non-coding downstream 95107 29080571 ~ 29081546 (-)
G2125815 NA non-coding downstream 96395 29079529 ~ 29080258 (-)
G2125814 NA non-coding downstream 97627 29078750 ~ 29079026 (-)
G2125812 NA non-coding downstream 99141 29077146 ~ 29077512 (-)
G2125888 NA non-coding upstream 23326 29297806 ~ 29298278 (-)
G2125887 NA non-coding upstream 24039 29298519 ~ 29299176 (-)
G2125937 NA non-coding upstream 41674 29316154 ~ 29316379 (-)
G2125943 NA non-coding upstream 75541 29350021 ~ 29350402 (-)
G2125813 NA other downstream 97909 29078039 ~ 29078744 (-)
G2125723 NA other downstream 290799 28885468 ~ 28885854 (-)
G2125290 NA other downstream 484183 28692139 ~ 28692470 (-)
G2125270 agla other downstream 513227 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 1126733 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1159955 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1279109 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1430605 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1969611 31244091 ~ 31244692 (-)

Expression


Co-expression Network