G2125887


Basic Information

Item Value
gene id G2125887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29298519 ~ 29299176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2430656
cataagttataaataaacaaacaaaacactcgGTTGGGGGCACTATATCGGCTGCCTTCTTCTCCGGTGCCATCTTACACATTCATATATGGAACTAATGTGGAATCCTTATATTATGTAGGGATACAATTGAATATCCTGGAAACAATATAGATTTTGCTATCCTTTTCCAGTAGACAGAATAAATGACCAATGTGATTATCTTCAGGGTGCGGTTTGACTGTTCCCAGTTCAGTTCAACCGTGCCTTTTTCCAATGGTATCCAGCTGCAACACTGAAGTAGCTGTGACTAAAACTAGGCTGTGACTAAAACCAATACTAACCCCATCTACTGGCCGTGGTTAATCCCTAccacatttattttaattttattgaacctttatctaactaggcaagtcagttaagaactaattcttatttactgGCAAAAGGCCTTCTgctgggattaaaataaaaatataggacaaaacatcacgacgagagacctaagacgacaacagcgtggcagcaacacatgacaacacaacatggtagcaacataacaaGGTAGCAGCATAAAAcgtggtacaaacattattgggcaaagacaacagcacaaaggacaagaacATAGAGATAACAATACATCAcataaagcagccacaactgtcagtaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2430656 True 658 lncRNA 0.39 1 29298519 29299176

Neighbor

gene id symbol gene type direction distance location
LOC110508881 ap2m1 coding downstream 5094 29283916 ~ 29293425 (-)
LOC110508879 LOC106599070 coding downstream 28996 29264829 ~ 29269523 (-)
LOC110508877 NA coding downstream 59319 29228842 ~ 29239200 (-)
LOC110508874 LOC106599072 coding downstream 78009 29203564 ~ 29220510 (-)
LOC110508876 NA coding downstream 95481 29200588 ~ 29203038 (-)
LOC110508883 LOC106599063 coding upstream 1474 29300650 ~ 29315173 (-)
LOC110508885 LOC106599059 coding upstream 21561 29320737 ~ 29330605 (-)
copb2 LOC106599054 coding upstream 31925 29331101 ~ 29346369 (-)
LOC110508887 LOC106599048 coding upstream 56475 29355651 ~ 29360875 (-)
LOC118944841 LOC106568934 coding upstream 72640 29370881 ~ 29378439 (-)
G2125888 NA non-coding downstream 241 29297806 ~ 29298278 (-)
G2125875 NA non-coding downstream 24039 29176653 ~ 29274480 (-)
G2125903 NA non-coding downstream 86081 29211946 ~ 29212438 (-)
G2125860 NA non-coding downstream 139506 29155229 ~ 29159013 (-)
G2125817 NA non-coding downstream 216973 29080571 ~ 29081546 (-)
G2125937 NA non-coding upstream 16978 29316154 ~ 29316379 (-)
G2125943 NA non-coding upstream 50845 29350021 ~ 29350402 (-)
G2125945 LOC106568934 non-coding upstream 56888 29356064 ~ 29378426 (-)
LOC118944842 NA other downstream 174777 29118684 ~ 29123806 (-)
G2125813 NA other downstream 219775 29078039 ~ 29078744 (-)
G2125723 NA other downstream 412665 28885468 ~ 28885854 (-)
G2125290 NA other downstream 606049 28692139 ~ 28692470 (-)
G2125270 agla other downstream 635093 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 1102037 30399711 ~ 30401807 (-)
G2127177 NA other upstream 1135259 30434435 ~ 30434854 (-)
G2127455 NA other upstream 1254413 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 1405909 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1944915 31244091 ~ 31244692 (-)

Expression


Co-expression Network