G2126288


Basic Information

Item Value
gene id G2126288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29866105 ~ 29866320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2431083
gcttctacccccaagccataagactgctttaCAATTAaacaaatggccacctggactatttacattgaacccccacccccaaatttgtttttacactgctgctgctcgctgttttatctatgcatagtcactttacccatacctacatgtacaaattaccttgactaacctgtacccccgcacattgactcggtactggtaccccctgtatatagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2431083 True 216 lncRNA 0.44 1 29866105 29866320

Neighbor

gene id symbol gene type direction distance location
LOC110508889 LOC106599045 coding upstream 204351 29410322 ~ 29661754 (+)
LOC110508882 LOC106599064 coding upstream 582951 29276406 ~ 29283154 (+)
LOC110508880 NA coding upstream 591651 29270737 ~ 29274454 (+)
LOC110508878 LOC106599189 coding upstream 610149 29246463 ~ 29255956 (+)
LOC118944852 NA coding upstream 633392 29228845 ~ 29233301 (+)
LOC110508893 marh2 coding downstream 7169 29873489 ~ 29877319 (+)
LOC110508895 LOC106599036 coding downstream 21683 29888003 ~ 29893380 (+)
LOC110508896 NA coding downstream 38020 29904340 ~ 29906026 (+)
LOC118944851 NA coding downstream 48510 29914830 ~ 29921206 (+)
LOC110508899 LOC100136537 coding downstream 57906 29924226 ~ 29927553 (+)
G2126287 NA non-coding upstream 677 29865087 ~ 29865428 (+)
G2126269 NA non-coding upstream 29821 29834989 ~ 29836284 (+)
G2126266 NA non-coding upstream 43947 29817636 ~ 29822158 (+)
G2126264 NA non-coding upstream 56788 29809108 ~ 29809317 (+)
G2126237 NA non-coding upstream 68199 29775614 ~ 29797906 (+)
G2126297 NA non-coding downstream 19745 29886065 ~ 29886364 (+)
G2126300 NA non-coding downstream 33757 29900077 ~ 29900320 (+)
G2126339 NA non-coding downstream 88931 29955251 ~ 29956186 (+)
G2126322 NA non-coding downstream 111574 29977894 ~ 29979426 (+)
G2126323 LOC106599023 non-coding downstream 114712 29981032 ~ 29982292 (+)
G2125614 LOC106599059 other upstream 542721 29320743 ~ 29323384 (+)
LOC110508851 LOC106599130 other upstream 1327693 28522217 ~ 28551515 (+)
LOC110508827 LOC106599210 other upstream 2142117 27720549 ~ 27725061 (+)
G2123170 NA other upstream 2756823 27106034 ~ 27109282 (+)
G2126497 NA other downstream 343927 30210247 ~ 30211633 (+)
kcnn1a LOC106598974 other downstream 668531 30534338 ~ 30592397 (+)
G2127299 LOC106598972 other downstream 774367 30640687 ~ 30641243 (+)
LOC110508221 LOC106598877 other downstream 1773982 31594783 ~ 31643462 (+)
G2128189 NA other downstream 1872992 31739312 ~ 31740070 (+)

Expression


Co-expression Network