G2126966


Basic Information

Item Value
gene id G2126966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 29989503 ~ 29991551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2431895
TTGAGGCACATTTTTGTGTTGGGTGTACAGTAGCCTCTTGGCCCAAACTGACAATGGTATTACCCTCATCAAGCCAATAGGTGGCATAATAGTGTAGGACTCCCACTGCTACCTACCTATTTTACCCCTTTTTATTTCAATGTAACAAAGCCTGTAATACAACATGATAGGGGGAGCGGGGGAAACAATATGCACCTATTCTACACTAATCCATTGCTGGTAGAGGCTATAATAAATAGCTGGCACAATGTGTAATAGGACAGGAACTGAAATAAAGTACAGTCGGTCCACAACAACATTTGACAACAGAATAAACAATTCATAGAATTTAATAAAACAGCTTTGAGAGGTCAAATCCCGTTCAAAATGGCTACATAGGGCCAACAACGAAGGCTACATTCATGGATAGCGACAGATACACAGAGTTGCACAACATTAAATTACTGTAGCCAACACGAGCTTACAAGACATGCACAATTCATATTTGCAGAAAATATAAAAGACAGTATGCAAAATAAGACATGTTTTagtaaataaaatatacatttgtcATTGGTAAATAAGTGCTTGTAAACAAGTAAGGCATTATATATTACACAGTGGATGACATGCGCTCACTGACATTCTGGTGTTTAGGTGCACTCATTGAGATTGTCCAGTTTACATGCAGATAATGCTATCCTTGTTCGGCTATGTATTACTGTCCATTGGAGAGCTGATAGTGCATTTTCCTCTGAAGAGGGCAGCAAAATTAGTCTGTTAGCCACATTTTTTAAGAGAGACCCATAGTGTTCCAGTTCTAATGGATTTTCAGCAATGAGTTTGTATTCTATTAGAACAGGCAAATAGCCTACTGGGTTTCAGTTAGTCCATATCCCCAAAGGATAACGAACCCCATGGTGGTGGGTACCTCATAGGCCTACATTGTCCTCTAGTAAGCTTGATCTTGGTTTGGGAGAAGTTGACATCCATTACTGACATGGTTCATAACCTTTTGTTTCAACTGGGCTACTTGCTCTCTAAGCACACTGGCTGTGGAGGCCAGTTCAGTGTTCTGTGTCTTAAGGTTTTTGACCTTGTCTTCAAGACGGGATATTCTCTCCAGTTTTCTTTTGCGGCACTTGGACGCCGCTATTCTGTTGCGCAGCTTTTTCCTCTCTGCTTTGATGCGCTCCTGGTTGTCCATGTCAATAGGAGACAAAGGCGGGCTGTCTCCAAAGCACTGCATGTCGGGGACCGTCTGCGGCTCGTCCTTCAACGCCTGGAGTCGTGACAGAGCCGCCGCAGCCGCCTGTTGATGCGCGCTCATCAGATGAGAAGGTGGTGGTGGGAATGGAATTGTATCCGTGGAATAATTCACTGTGCTGCCCAGTGGACTATTACCATAGCCGTTCAATGTCGTGTACACTGGCAGATCTGACGGCAAGCCGATTGGGGCTGCGTTGGAGCTGATAAGGTCCAGTCTGTCCGGCGGTACGCACGTCCCCTCGCTCAGCTGGTTCTGCTTGTGAAGATCCTCAAGCGCCTTCACGAAGCCTTCGGCAAATTCCTGTTCGTCACTGGCTGACTTTGGGTAGAGGAACTGAGAGGTTGGGATCGTGGTAACCATTCCATTCGATTGGATAATCAATCGTTCAAGGTCCGGAGTCGCCAATTTCAAGAGTCCCAAGTCCGGGGAGTTCAGAATTCCCTCTGCGTCCCGGAGATTCGGTTTCAGAATCGAGCTTTGGTCATCCAGGTTTAGACAAATGTCTTTCTTCATCATGCTGTTGTAGGAATAGAGGCTTGAAATCCCTCGAGTATTCAACACATTACAAGGGTAGAGGGTTGTTTCCATTCTAACCCCTCACACGAGGGTATGTTGAGGTTTACGCATAAACTAAGGCGATTCAACCGTTAAATCCGGCAATAAAACACACAGTTCAGGTTACAGTTTCCTGTATTTTTCCTATCTTCAAACTCTGGTTCCCCTTTACCTGTACCCCTGAGGCTAAAACAACAGTCGTGGCTTGGCTTTTCCTGTTCTTCTCGCCCGTATGAACTCTTTTC

Function

NR:

description
transcription factor jun-D-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2431895 True 2049 lncRNA 0.45 1 29989503 29991551

Neighbor

gene id symbol gene type direction distance location
LOC110508901 LOC106599023 coding downstream 4975 29981103 ~ 29984528 (-)
LOC110508900 LOC106599024 coding downstream 12165 29967565 ~ 29977338 (-)
LOC110508897 LOC106599029 coding downstream 28962 29929002 ~ 29960541 (-)
LOC110508894 LOC106599038 coding downstream 105968 29876749 ~ 29883535 (-)
slc25a36a LOC106568938 coding downstream 117319 29821881 ~ 29872184 (-)
LOC110508903 LOC106599022 coding upstream 42 29991593 ~ 29998944 (-)
LOC110508904 LOC106599012 coding upstream 7903 29999454 ~ 30032487 (-)
LOC110508906 LOC106568950 coding upstream 109090 30100641 ~ 30114984 (-)
LOC110508907 LOC106599005 coding upstream 152484 30144035 ~ 30187260 (-)
mast3a LOC106599001 coding upstream 197334 30188885 ~ 30253370 (-)
G2126964 NA non-coding downstream 1285 29987806 ~ 29988218 (-)
G2126963 LOC106572245 non-coding downstream 1900 29987336 ~ 29987603 (-)
G2126961 NA non-coding downstream 3400 29985893 ~ 29986103 (-)
G2126894 NA non-coding downstream 10088 29977789 ~ 29979415 (-)
G2126937 NA non-coding downstream 85662 29903521 ~ 29903841 (-)
G2126989 NA non-coding upstream 56258 30047809 ~ 30049693 (-)
G2127025 NA non-coding upstream 135065 30126616 ~ 30126860 (-)
G2127031 NA non-coding upstream 145558 30137109 ~ 30143209 (-)
G2127056 NA non-coding upstream 203579 30195130 ~ 30223590 (-)
LOC118944842 NA other downstream 865761 29118684 ~ 29123806 (-)
G2125813 NA other downstream 910759 29078039 ~ 29078744 (-)
G2125723 NA other downstream 1103649 28885468 ~ 28885854 (-)
G2125290 NA other downstream 1297033 28692139 ~ 28692470 (-)
G2125270 agla other downstream 1326077 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 409662 30399711 ~ 30401807 (-)
G2127177 NA other upstream 442884 30434435 ~ 30434854 (-)
G2127455 NA other upstream 562038 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 713534 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1252540 31244091 ~ 31244692 (-)

Expression


Co-expression Network