G2126989


Basic Information

Item Value
gene id G2126989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30047809 ~ 30049693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2431919
cacacacgcacagagagacaCTCACCCTCGCTCTCTTATACAGGAAGCATAGGGTCAGAGTGGCAGGCTGGTACACAGGAGCCACAGCTTGCATTGCTGTAGGACTACACAATGACAGGAGTCAGTGCTGAGGTGGAGTTCTAACAACCAGAGGGAAACAGGTAACGGTGTTTTGTTTGTGAACCTCAAGAAACCTGAACCACGGACAGATGTATGGAGACAGAGAGCCACTGAGAACAAACAGAATGCAATGGACACCAGACAGAGTCTGCGGTTTTCTGCTTCTTTTCAAGAACTCATCTATCTGCTGTCTTCATTGATGTTTCACACCAAATGCTGAAGAAATGAACTATAATGTTTGCTTTTTATCTTGATGCTTGAAGAACAGATCAAATGCATATTTCTATCATTTCCCCATGTTTTGGAGCCTGGAGCTTCTGCCTAAGAGACAATGAGAACCGAAGGTGAATCCAGAAGAGCTGGCCTTCTGACAGAAAAAAAACGGACCCTGGGTTGTACAGGGATGCCAACCTGAGAAGAGGCAcgaagagcaagagagaaaaggAAGGTGAAAATGAGTGGGCCAACAAACTGTGGATTCTATTTTTCTGCAGATCGCTCTTTCCAAGTGCGGAACGGGAATATCTGTGGATCGCCCTGTTCCGTCAACAGGCCTATAGACATCAAACAAAAAAGCAGGCGGTAATATGCTGTACAAATCTAAATGTTGCCTTGCCGTTTGCATGCTATTGTAGAATGCAGCATCGTTGGAGTAGTGTCATTAAAATTGCTACGATGACTCAAAAGAAAGCTATGATAATGGTTGTTGAGATGACGCCAACTAAGCTCACTTTTGCTCTTGTTAAATGTTTGCTGTGTAATTTAACGTTTCCTCCCACATTTTCCAGCGTGCCTCTCAGCTACATTATTATATAGTATCCTCCATTATGAGGTAAACTTATTAGTTCATTCAGAAACGCATACCGTAGCCTACAGCCATATCACTTCAAGGATGGCCTCCTACATACAAACGATAGCCTTGAGTATAGCAGTTGATTCGGGCAGCTGAGATAGAGAGCCAGTGAGGCAATTCAGTGATCCAGAAATTATCTAAATAAACAGCACCTTAGAAGCGTCTCCAAGCTTCTCCCCTCCACTATCAGTTAGAATGTGTGGACTGTGGGAGAAcaagtctatctctctctctcacacacacacacacacacacacaacaaagctctccctcaatTCCAATTAATCTTCTCACAAAGCTCAAGAAGTTGGAGATTtgtacatcacatacactataaTCCTCAATGCCAGTGGAGAGGGAGGACGCTGAGGTAGACATTTTTGCATTTCATTCCTCTGTCCCTGTTCTCCTGCATGCTCTATGTTAACTGGATTTAAAGTAGAACATTTGGGAGTATGGGAATTAGAGGGAAATCACTAGCCTCCGGTATCTCATGAACAATATGACTTGGATTGTTTTCCCCTCAGCATTTGGAAATAGAGAATAGATTTATTTTGTTCCAAAAATTATGTAGGATTTGCCTGAACAATAACCAACAACTCTGCAAAATGTTGGAATAAAAGTAATTGTATATTTGATTCAGTTGAATGGCTTAGGCAAACAGTTTATTGGAAAAATCAATCACACTTGTACTGTACCAGAGCTTTTTCCAACCACCCTCCTGTGCTGTATCACCATGAGATCGGCCACTGATgggcagtgtttccc

Function

NR:

description
cAMP-specific 3',5'-cyclic phosphodiesterase 4D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2431919 True 1741 lncRNA 0.43 2 30047809 30049693

Neighbor

gene id symbol gene type direction distance location
LOC110508904 LOC106599012 coding downstream 15322 29999454 ~ 30032487 (-)
LOC110508903 LOC106599022 coding downstream 48865 29991593 ~ 29998944 (-)
LOC110508901 LOC106599023 coding downstream 63281 29981103 ~ 29984528 (-)
LOC110508900 LOC106599024 coding downstream 70471 29967565 ~ 29977338 (-)
LOC110508897 LOC106599029 coding downstream 87268 29929002 ~ 29960541 (-)
LOC110508906 LOC106568950 coding upstream 50948 30100641 ~ 30114984 (-)
LOC110508907 LOC106599005 coding upstream 94342 30144035 ~ 30187260 (-)
mast3a LOC106599001 coding upstream 139192 30188885 ~ 30253370 (-)
LOC110508910 NA coding upstream 224200 30273893 ~ 30279240 (-)
LOC110508912 NA coding upstream 251394 30301087 ~ 30304412 (-)
G2126966 NA non-coding downstream 56258 29989503 ~ 29991551 (-)
G2126964 NA non-coding downstream 59591 29987806 ~ 29988218 (-)
G2126963 LOC106572245 non-coding downstream 60206 29987336 ~ 29987603 (-)
G2126961 NA non-coding downstream 61706 29985893 ~ 29986103 (-)
G2127025 NA non-coding upstream 76923 30126616 ~ 30126860 (-)
G2127031 NA non-coding upstream 87416 30137109 ~ 30143209 (-)
G2127056 NA non-coding upstream 145437 30195130 ~ 30223590 (-)
G2127102 NA non-coding upstream 254730 30304423 ~ 30304655 (-)
G2127106 NA non-coding upstream 261511 30311204 ~ 30311541 (-)
LOC118944842 NA other downstream 924067 29118684 ~ 29123806 (-)
G2125813 NA other downstream 969065 29078039 ~ 29078744 (-)
G2125723 NA other downstream 1161955 28885468 ~ 28885854 (-)
G2125290 NA other downstream 1355339 28692139 ~ 28692470 (-)
G2125270 agla other downstream 1384383 28662708 ~ 28663426 (-)
LOC110508917 LOC106598978 other upstream 351520 30399711 ~ 30401807 (-)
G2127177 NA other upstream 384742 30434435 ~ 30434854 (-)
G2127455 NA other upstream 503896 30553589 ~ 30555187 (-)
LOC110508928 mrpl34 other upstream 655392 30705085 ~ 30706591 (-)
G2128216 NA other upstream 1194398 31244091 ~ 31244692 (-)

Expression


Co-expression Network