Gene
RNA
| Item | Value |
|---|---|
| gene id | G2127508 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 30668813 ~ 30669133 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: SH3 domain-containing protein C23A1.17-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2432500 | True | 321 | lncRNA | 0.45 | 1 | 30668813 | 30669133 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508217 | LOC106598972 | coding | downstream | 18978 | 30629942 ~ 30649835 (-) |
| LOC110508919 | NA | coding | downstream | 221365 | 30442013 ~ 30447448 (-) |
| angptl4 | angl4 | coding | downstream | 252169 | 30409271 ~ 30416644 (-) |
| LOC110508917 | LOC106598978 | coding | downstream | 267275 | 30399711 ~ 30401807 (-) |
| LOC110508912 | NA | coding | downstream | 364401 | 30301087 ~ 30304412 (-) |
| LOC110508927 | LOC106598960 | coding | upstream | 31409 | 30700542 ~ 30704777 (-) |
| LOC110508928 | mrpl34 | coding | upstream | 35952 | 30705085 ~ 30706591 (-) |
| ptger4c | LOC106599187 | coding | upstream | 236746 | 30905879 ~ 30907975 (-) |
| LOC110508937 | NA | coding | upstream | 309586 | 30978719 ~ 30980452 (-) |
| LOC110508938 | LOC106598935 | coding | upstream | 325962 | 30995095 ~ 31004289 (-) |
| G2127507 | NA | non-coding | downstream | 824 | 30667723 ~ 30667989 (-) |
| G2127503 | LOC106598970 | non-coding | downstream | 7073 | 30658507 ~ 30661740 (-) |
| G2127500 | NA | non-coding | downstream | 24199 | 30644334 ~ 30644614 (-) |
| G2127498 | NA | non-coding | downstream | 26488 | 30642064 ~ 30642325 (-) |
| G2127497 | NA | non-coding | downstream | 26798 | 30641631 ~ 30642015 (-) |
| G2127510 | NA | non-coding | upstream | 1695 | 30670828 ~ 30671191 (-) |
| G2127542 | NA | non-coding | upstream | 54999 | 30724132 ~ 30724541 (-) |
| G2127557 | LOC105030512 | non-coding | upstream | 79815 | 30748948 ~ 30756441 (-) |
| G2127570 | NA | non-coding | upstream | 119901 | 30789034 ~ 30804432 (-) |
| G2127455 | NA | other | downstream | 113626 | 30553589 ~ 30555187 (-) |
| G2127177 | NA | other | downstream | 233959 | 30434435 ~ 30434854 (-) |
| LOC118944842 | NA | other | downstream | 1545071 | 29118684 ~ 29123806 (-) |
| G2125813 | NA | other | downstream | 1590069 | 29078039 ~ 29078744 (-) |
| G2128216 | NA | other | upstream | 574958 | 31244091 ~ 31244692 (-) |
| G2128242 | LOC106584167 | other | upstream | 650150 | 31319283 ~ 31323364 (-) |
| LOC110508968 | LOC106598866 | other | upstream | 1042475 | 31708667 ~ 31761665 (-) |
| G2128568 | NA | other | upstream | 1213582 | 31882715 ~ 31883140 (-) |
