G2127673


Basic Information

Item Value
gene id G2127673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 30985073 ~ 30986114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2432678
AAATTATTGAATGGAAAATTCTTAACATTAATGAATAACTTAAAATAAATATAACTTAAATATACATTAACctcttaaattaaaataaatgtacatgatcatctatagaatgatataacaaacaaaataataaaattagCAGCAGATTTTTGAACTAAGTACACATACCGACTAGAAAATAAGCAGCTGTAAAAATGGAAATGCCTGATGGTGGCGCTAGAGGAAAGGTCAAGAGGTCACCAAATCAATAGGTTTCTTCCACTTGGGGTCTTGATTGTGCACAACTAATTTTACGGCAATCCAGCCATTACTTTGAGATTTATCTTGTTCTCAGTCTTGTTCTCAGCCTGTTCTCAGTCTTGTTCTCAGCCTGTGGGCATCATGTGTGTAGTGATCCAATATCCATAGCCATGCCATTAAACAGTTATCACTGGCCCTTGCTCAGCCTTACTCACCAAGAGCCCAGCGCCGAGCCTTCTTGCTAGCAATGTCACCGATCAAATCTTTGAAGTCCAGCTTTCTAGCTAACTAACTTTCAATGGACAGCTTGGCAAGACTGCAAAGCCTGTCCTGGGACATAGTGGACCTCAAATAGTTTAGTAGTTTTATCTTACTGAAAGCTCTCGCCACCAGCAAGTCACAGGCAGTGGGCAAAATATACGTAAAGCAATGCACACTTTTCCAAAAATGCTTTGCAGTTGCATCTTCCAAATTGCATTCAGGAGCCCAAGAGGGGACAAGTTAGGGGGGAAAGTGGCAgaatatacagtgttcaggtggcTTCATTTTGAAACTCAGGTGTCAGATCTCTGGAATACTTCATAATCAGTGGTTGGCACACAGAAGAGACTTTATCCTCACTAATCTGCCCGACTTTCAGAACAGCACAAAATCATTCTACAATTTTTGCAGTGGTGTGGAACCTAGTGTCCAAGTCACTTATGATGttgtccatagcagtaaaaaacaCTATGTTCCAAAACACAGTTGCTGCACTGTCCTGAGCGGTCTCCTCTTGAGGTCTCATCATGGAATCAGAGGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC109067867

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2432678 True 1042 lncRNA 0.40 1 30985073 30986114

Neighbor

gene id symbol gene type direction distance location
LOC110508937 NA coding downstream 4621 30978719 ~ 30980452 (-)
ptger4c LOC106599187 coding downstream 77098 30905879 ~ 30907975 (-)
LOC110508928 mrpl34 coding downstream 278482 30705085 ~ 30706591 (-)
LOC110508927 LOC106598960 coding downstream 280296 30700542 ~ 30704777 (-)
LOC110508217 LOC106598972 coding downstream 335238 30629942 ~ 30649835 (-)
LOC110508938 LOC106598935 coding upstream 8981 30995095 ~ 31004289 (-)
LOC110508940 gbg12 coding upstream 98201 31084315 ~ 31136167 (-)
LOC110508941 gp177 coding upstream 151972 31138086 ~ 31169294 (-)
LOC110508942 LOC106598932 coding upstream 187813 31173927 ~ 31214079 (-)
LOC118944807 LOC106598929 coding upstream 267819 31253933 ~ 31254937 (-)
G2127637 NA non-coding downstream 53607 30924247 ~ 30931466 (-)
G2127615 NA non-coding downstream 100288 30884465 ~ 30884785 (-)
G2127614 NA non-coding downstream 101662 30883183 ~ 30883411 (-)
G2127609 NA non-coding downstream 110062 30874419 ~ 30875011 (-)
G2127584 NA non-coding downstream 170339 30814233 ~ 30814734 (-)
G2127817 gbg12 non-coding upstream 9044 30995158 ~ 31136091 (-)
G2128197 NA non-coding upstream 232948 31219062 ~ 31219909 (-)
G2128215 LOC100380853 non-coding upstream 256053 31242167 ~ 31242441 (-)
G2128200 NA non-coding upstream 259008 31245122 ~ 31283855 (-)
LOC110508945 LOC106598921 non-coding upstream 260161 31246275 ~ 31305211 (-)
G2127455 NA other downstream 429886 30553589 ~ 30555187 (-)
G2127177 NA other downstream 550219 30434435 ~ 30434854 (-)
LOC110508917 LOC106598978 other downstream 583266 30399711 ~ 30401807 (-)
LOC118944842 NA other downstream 1861331 29118684 ~ 29123806 (-)
G2128216 NA other upstream 257977 31244091 ~ 31244692 (-)
G2128242 LOC106584167 other upstream 333169 31319283 ~ 31323364 (-)
LOC110508968 LOC106598866 other upstream 725494 31708667 ~ 31761665 (-)
G2128568 NA other upstream 896601 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 1036944 32023057 ~ 32029225 (-)

Expression


Co-expression Network