G2128336



Basic Information


Item Value
gene id G2128336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31523536 ~ 31523871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2433413
CAGACACCCAACCATGACATCCAACCACTGGGTTGGCTCGAGTTACCTGGATGACTGCACTGGAGGGGCGTTTTCAAGGCTGTGAATGTAAAGTAAGAATAAGGTAGTCTACGATGGAGCCAGAAATATTGTGTGGGACTGCGTTTATTGTCCCATATGGACAAAATTAGCCAACAGACTAGGTCTAGCTGTTATAAACACTATCTTCACCACCCATGCCACCACTTGAAGTGCCACATCCTCATACAGTATGCCTAAATTCATTTGATAATGATGAACAGTTTAGTTTCAAAGCCTCAGACATGGTATGCTCAGGCTAGTCTGGCAGGAGGGCCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2433413 True 336 lncRNA 0.46 1 31523536 31523871

Neighbor


gene id symbol gene type direction distance location
trnap-ugg-71 NA coding downstream 1964 31521501 ~ 31521572 (-)
LOC110508960 LOC106598900 coding downstream 12313 31508406 ~ 31511223 (-)
cldn18 LOC106598896 coding downstream 15249 31505514 ~ 31508287 (-)
LOC110508958 LOC106598897 coding downstream 32698 31471294 ~ 31490838 (-)
LOC110508219 LOC106598894 coding downstream 57089 31433122 ~ 31466447 (-)
stk25b stk25 coding upstream 18887 31542758 ~ 31560379 (-)
trnav-aac-156 NA coding upstream 36855 31560726 ~ 31560798 (-)
thap4 thap4 coding upstream 53007 31576878 ~ 31584196 (-)
nilt2 nilt2 coding upstream 155552 31679423 ~ 31694153 (-)
LOC110508968 LOC106598866 coding upstream 184796 31708667 ~ 31761665 (-)
G2128330 NA non-coding downstream 11530 31511784 ~ 31512006 (-)
G2128278 NA non-coding downstream 18660 31504064 ~ 31504876 (-)
G2128326 NA non-coding downstream 20614 31502277 ~ 31502922 (-)
G2128286 NA non-coding downstream 29111 31491194 ~ 31494425 (-)
G2128307 NA non-coding downstream 54980 31468320 ~ 31468556 (-)
G2128341 NA non-coding upstream 17420 31541291 ~ 31541507 (-)
G2128345 NA non-coding upstream 27891 31551762 ~ 31554729 (-)
G2128353 bok non-coding upstream 46606 31570477 ~ 31572013 (-)
G2128316 bok non-coding upstream 49613 31573484 ~ 31593171 (-)
G2128242 LOC106584167 other downstream 200172 31319283 ~ 31323364 (-)
G2128216 NA other downstream 278844 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 816991 30705085 ~ 30706591 (-)
G2127455 NA other downstream 968349 30553589 ~ 30555187 (-)
G2127177 NA other downstream 1088682 30434435 ~ 30434854 (-)
G2128568 NA other upstream 358844 31882715 ~ 31883140 (-)
LOC110508982 NA other upstream 499187 32023057 ~ 32029225 (-)
asip2b agrp2 other upstream 538178 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 704535 32228406 ~ 32230258 (-)

Expression



Co-expression Network