Gene
RNA
| Item | Value |
|---|---|
| gene id | G2128440 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 31742995 ~ 31749753 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2433559 | True | 658 | lncRNA | 0.55 | 2 | 31742995 | 31749753 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508968 | LOC106598866 | coding | downstream | 27181 | 31708667 ~ 31761665 (-) |
| nilt2 | nilt2 | coding | downstream | 48842 | 31679423 ~ 31694153 (-) |
| thap4 | thap4 | coding | downstream | 158799 | 31576878 ~ 31584196 (-) |
| trnav-aac-156 | NA | coding | downstream | 182197 | 31560726 ~ 31560798 (-) |
| stk25b | stk25 | coding | downstream | 182616 | 31542758 ~ 31560379 (-) |
| LOC110508970 | LOC106598862 | coding | upstream | 72389 | 31822142 ~ 31859100 (-) |
| LOC110508975 | LOC106598852 | coding | upstream | 202446 | 31952199 ~ 31954935 (-) |
| LOC110508977 | NA | coding | upstream | 210748 | 31958284 ~ 31967067 (-) |
| LOC110508978 | NA | coding | upstream | 251502 | 32001255 ~ 32014890 (-) |
| LOC110508982 | NA | coding | upstream | 273304 | 32023057 ~ 32029225 (-) |
| G2128426 | NA | non-coding | downstream | 7450 | 31681262 ~ 31735545 (-) |
| G2128436 | NA | non-coding | downstream | 19359 | 31720141 ~ 31723636 (-) |
| G2128418 | LOC106598876 | non-coding | downstream | 73208 | 31668715 ~ 31669787 (-) |
| G2128399 | NA | non-coding | downstream | 99532 | 31638710 ~ 31643463 (-) |
| G2128386 | NA | non-coding | downstream | 122846 | 31619740 ~ 31620149 (-) |
| G2128522 | NA | non-coding | upstream | 22070 | 31771823 ~ 31772793 (-) |
| G2128524 | NA | non-coding | upstream | 23668 | 31773421 ~ 31773659 (-) |
| G2128536 | LOC106598864 | non-coding | upstream | 45680 | 31795433 ~ 31801315 (-) |
| G2128556 | NA | non-coding | upstream | 127639 | 31877392 ~ 31879509 (-) |
| G2128569 | NA | non-coding | upstream | 133826 | 31883579 ~ 31884197 (-) |
| G2128242 | LOC106584167 | other | downstream | 419631 | 31319283 ~ 31323364 (-) |
| G2128216 | NA | other | downstream | 498303 | 31244091 ~ 31244692 (-) |
| LOC110508928 | mrpl34 | other | downstream | 1036450 | 30705085 ~ 30706591 (-) |
| G2127455 | NA | other | downstream | 1187808 | 30553589 ~ 30555187 (-) |
| G2128568 | NA | other | upstream | 132962 | 31882715 ~ 31883140 (-) |
| asip2b | agrp2 | other | upstream | 312296 | 32062049 ~ 32187519 (-) |
| LOC110508997 | NA | other | upstream | 478653 | 32228406 ~ 32230258 (-) |
| G2130393 | NA | other | upstream | 1648794 | 33398547 ~ 33399084 (-) |
