G2128582


Basic Information

Item Value
gene id G2128582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31895696 ~ 31898461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433725
ATGCTCTCGTTGACGATGCAGTTTCCATGAATCAGCACGGCGTCACAGGGCATGATCATTCCATTGGACGGGATGACGATGACATCACCGGGGACCAGCTCTGTGGACATGGCCTCCTCGACATCTGTGTTCAACACAACACCacaggggtatactacaaagcaggagcCAGCTAACTGTgataaacaaccagaaataactatGGATTTTCTGTTTCATTAAGAAAGctaaactaaataaataaaaaaggtatATAATAATATTtaggcaagttagctggctaactccttGTTCCggtttgtagtatacccctctggtCAGATGACGAACCCATAACAAGCAGCATAGTCCATAAGGAGGACTTGTTTTTCCTTCAcaatcaacaaaaaatgtaaataaataaataaaaagatgtAATAAAAGATGTAGGATGAAATTATACCCATTATCAAATCATCATCAAGTACACATTGTCGACCATTATCAAATACACATTATCAATGTAATACTTCAAAAGTGTAACCGAAACCTTGGAAAGGAGGAAGTCACTAATAAAATGCAATAATAGATGAATAATAATGAAtacagtacattaatctctaTAGTTACAAACCTAGAGTCCCTCTGCACACTGAGACACGTACGACACTGTGTGTCGCCACCATGTCATGCAGCATGATGTATTGCTGTGAGCAGAGAAAAAGGGGAATCCATTAAAAGAAACATAAGCTAAACAACACAGAAGTCATctattaaaaacaacaacaaaaatatgttttaagtGAGAATTGGTTTGTACCCGAAAAAAGGAAATTCACGAGCACCACAATGCCTTTTCGACCCATTCTCTACCacggttttccagcacacagctttgacctactacagtagctatgttggtattATACttcaaactatgtgtaggcaggttgcttaggattcaaccTTCTCCTATATGATGGTAGGGAGATTTGAAGTTAAcgctagccccccccccccaataataaCTATTCTGTCATTGCCAAGGAACGAGTAACATTTAACTTCGATAACTCTGATTGAGAGGCAACATGGCCGCCACTTCCGCTACATGAGGAAGTGCTTAGTCTAGGACGACCACCCACCTTCTTGACGGTGTACAGCGAGGTAGCTATGGATATGACAGACATGAAGACT

Function

NR:

description
probable cation-transporting ATPase 13A3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433725 True 1176 lncRNA 0.40 2 31895696 31898461

Neighbor

gene id symbol gene type direction distance location
LOC110508970 LOC106598862 coding downstream 36596 31822142 ~ 31859100 (-)
nilt3 nilt3 coding downstream 132608 31718689 ~ 31763088 (-)
LOC110508968 LOC106598866 coding downstream 179882 31708667 ~ 31761665 (-)
nilt2 nilt2 coding downstream 201543 31679423 ~ 31694153 (-)
thap4 thap4 coding downstream 311500 31576878 ~ 31584196 (-)
LOC110508975 LOC106598852 coding upstream 53738 31952199 ~ 31954935 (-)
LOC110508977 NA coding upstream 62040 31958284 ~ 31967067 (-)
LOC110508978 NA coding upstream 102794 32001255 ~ 32014890 (-)
LOC110508982 NA coding upstream 124596 32023057 ~ 32029225 (-)
LOC110508983 LOC106598841 coding upstream 136362 32034823 ~ 32063453 (-)
G2128577 NA non-coding downstream 1113 31893543 ~ 31894583 (-)
G2128574 NA non-coding downstream 6432 31889049 ~ 31889264 (-)
G2128569 NA non-coding downstream 11499 31883579 ~ 31884197 (-)
G2128556 NA non-coding downstream 16187 31877392 ~ 31879509 (-)
G2128536 LOC106598864 non-coding downstream 94381 31795433 ~ 31801315 (-)
G2128583 NA non-coding upstream 272 31898733 ~ 31898993 (-)
G2128584 NA non-coding upstream 1201 31899662 ~ 31899898 (-)
G2128585 NA non-coding upstream 1634 31900095 ~ 31900384 (-)
G2128587 NA non-coding upstream 2377 31900838 ~ 31901045 (-)
G2128589 NA non-coding upstream 6811 31905272 ~ 31905915 (-)
G2128568 NA other downstream 12556 31882715 ~ 31883140 (-)
G2128242 LOC106584167 other downstream 572332 31319283 ~ 31323364 (-)
G2128216 NA other downstream 651004 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 1189151 30705085 ~ 30706591 (-)
asip2b agrp2 other upstream 163588 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 329945 32228406 ~ 32230258 (-)
G2130393 NA other upstream 1500086 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 2141745 34040206 ~ 34066665 (-)

Expression


Co-expression Network