Gene
RNA
| Item | Value |
|---|---|
| gene id | G2128593 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 31909472 ~ 31910558 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable cation-transporting ATPase 13A3 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2433736 | True | 1087 | lncRNA | 0.44 | 1 | 31909472 | 31910558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508970 | LOC106598862 | coding | downstream | 50372 | 31822142 ~ 31859100 (-) |
| nilt3 | nilt3 | coding | downstream | 146384 | 31718689 ~ 31763088 (-) |
| LOC110508968 | LOC106598866 | coding | downstream | 193658 | 31708667 ~ 31761665 (-) |
| nilt2 | nilt2 | coding | downstream | 215319 | 31679423 ~ 31694153 (-) |
| thap4 | thap4 | coding | downstream | 325276 | 31576878 ~ 31584196 (-) |
| LOC110508975 | LOC106598852 | coding | upstream | 41641 | 31952199 ~ 31954935 (-) |
| LOC110508977 | NA | coding | upstream | 49943 | 31958284 ~ 31967067 (-) |
| LOC110508978 | NA | coding | upstream | 90697 | 32001255 ~ 32014890 (-) |
| LOC110508982 | NA | coding | upstream | 112499 | 32023057 ~ 32029225 (-) |
| LOC110508983 | LOC106598841 | coding | upstream | 124265 | 32034823 ~ 32063453 (-) |
| G2128592 | NA | non-coding | downstream | 327 | 31908494 ~ 31909145 (-) |
| G2128591 | NA | non-coding | downstream | 1594 | 31907581 ~ 31907878 (-) |
| G2128590 | NA | non-coding | downstream | 1958 | 31907251 ~ 31907514 (-) |
| G2128589 | NA | non-coding | downstream | 3557 | 31905272 ~ 31905915 (-) |
| G2128587 | NA | non-coding | downstream | 8427 | 31900838 ~ 31901045 (-) |
| G2128579 | NA | non-coding | upstream | 7458 | 31918016 ~ 31921125 (-) |
| G2128581 | NA | non-coding | upstream | 10700 | 31921258 ~ 31921736 (-) |
| G2128580 | NA | non-coding | upstream | 11534 | 31922092 ~ 31922692 (-) |
| G2128608 | LOC106599183 | non-coding | upstream | 24470 | 31935028 ~ 31935644 (-) |
| G2128568 | NA | other | downstream | 26332 | 31882715 ~ 31883140 (-) |
| G2128242 | LOC106584167 | other | downstream | 586108 | 31319283 ~ 31323364 (-) |
| G2128216 | NA | other | downstream | 664780 | 31244091 ~ 31244692 (-) |
| LOC110508928 | mrpl34 | other | downstream | 1202927 | 30705085 ~ 30706591 (-) |
| asip2b | agrp2 | other | upstream | 151491 | 32062049 ~ 32187519 (-) |
| LOC110508997 | NA | other | upstream | 317848 | 32228406 ~ 32230258 (-) |
| G2130393 | NA | other | upstream | 1487989 | 33398547 ~ 33399084 (-) |
| G2130771 | LOC106598333 | other | upstream | 2129648 | 34040206 ~ 34066665 (-) |
