G2128579


Basic Information

Item Value
gene id G2128579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31918016 ~ 31921125 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433722
gcttttctttcaaaaacaaggacatttctaagtgaccccaaacctttaaACGGTAGTGTAAACTAGACAATACAGGCGATACATCAGTTGTAAACCATGTACTGTACAAATTGAAAAAACAGATATTAAAATTAGCTGTTAATATCAGAGAATATAAAATACAATCAAAATGTGATATCTTTTCAAAATAATTCCCTTTAATAAAAGCAGCATTTAGGTCAGGTGCAATGGTTTATAAATGTTACAAAATGTTACATCACCTCATTCCCACCCGTCACCTCACTTGGATACTCTAGGTCCGCTATTCTACAGAGATCAATTGTTTCATATGAGGAGAtggtacagaatgtcacctttttatttgagggtattctCATACATATCCGTTTTATCGTTTAGAGATTAAAGCCCTTCGTGTATTTAGTCCACCTATTTGAACGTTTCAAGTATTTGACGCCTTTAAAATGGGAGGACTAGATACatataaagtgctttcatttctaaatggtaaaagatatatatgaaaatacctGACAATAAAAGGTGCCATgctgtactgtcgcctcatatgaaacatttgatcttaaATCCAAAATGCTAAAGTATAGAGCTGAATTAAAACGTTTTAGCTTCAGCGTCCAAATAAATACGTACAGGAGTGTACGTGCACACACCCACcaggtttttttctggatcaaaattACGGTTAGGATCGTGGCTGTGACGGGGGCGTGGTGAATAGTGCGGTTGCCGACTGAACATTTTAGAGGCCCTCTTGGCCGCAGAAAAAaaatgtcctgcaattctacacatatgTCATGATGTGAGAGAAGAATAATTGTCAATATAAATTttcattttgccatggcttatgcGTTGTTTGCTATCGGAGTGACTCAaacataacaaaatcaatgggggccccatgcCATGACAAAAATACTGAATGCATAATTTTTCTAATATTTGATTCTCCCTAACGGGCTAGATTTTATTTggggtgattgttagttctcaaagatcatcatattttatatatatatagatatatatggtttaagtcatttaagtttacactgaaaatgttttcccatctcaataATTTTTTATTAAGTCTTGCCCAAGACTTTTCTATGCAGAAAAAaccctgcacacacacgcacaaacacacaggcatcaGATCAACTCAAGTGTTCAGGTTTTACAAGAGTCACGGACACTCACATACTTCCACAGGAAGAATTACATTCATAAAGCGTAGCAAATTCTCAGAGAAACACAGCAATATATTATTGGTGCATTGGAATGTTATTCAATCTTGGCAAATACAGTAGTACCACTCAcgcttaaaacacacacacagtgctttcaAAATGCATAATCTGGGtgtgttgataaaaaaaaaattaaaatcccTCCATTTCCCTCAGTACGGTCCTGATCACACATGTTCTCTTTAACTCTTGACATTTCGTTGGAGCAGCAATCAAGGCAGGTGAGAAAGTGTTAGTGGACGATTCCATAGTTCTTAGTCTTTGTGAAGTTGAAAAATCAACCAGTGGTGAGTGCAAGGCAAGCCCTGTATTGGAAAGACATAATCTCTGGGCCTCGACACCAAGGCTAAACTAATAGCAAAAAGAGGGTGATAAATGCCCAGTATGGGGCAACCTGTCAGTAGTCACATTGCTGGGGTTCTATGTGTGGTTTGGGGGTTATGGGTAAGGACGGAGCAGTTAAGGTCTAGTTATGGTCAAGAAGTTGACAGGATCACAGTCTGATCTGGTTATAAACCAGGTCAGTTGTCCAGGCAATGGAAGTTTCTAGACTCGATATTGGTTATAAACTAGGGACGGGACGATATCAGTATTGCGATACTTGTTATTATCTTGGATAGGAAAAACGAAgcagatttaacttctttaggaaaacagcccttaTGTtggagtcacatttatttattttcctagctatagatgggttagctgacaatGTCACGAAAACGATGCACACACATCAAATGGGGCAGAAGTCTgcgttgttgtgattctggatggctaGATAGATACCAACAATtacaagaaactgccatgtggggaatcgcaagtgattcatttcagctagtttcatgtcttgttttgaggtgttttgactgatttcatgtcaatgctaatatggctcaaattcgctagctagctaacaactgttacaatgtatttgagagacaagtgctcattgtgcaaatggaTTTtggttttcaataaacattggagaataaatatagttgacatgttgtcaacaatctaagccaacccatCTGTTTTTCCTCATAGTTACGCACGCGTCCGTTTTGTTACTTAACAACCAACCTGCCTATTGCAGACAATATTTTActtacagcaggtttttaaaatacctaagagtttggtctgcttcatgttttcatttttgccatggaaaaaatattgcTATACTGGTATCATCACAGCCCTACTTGTCCAGGCAAAGGAAGGTACTATACTTGATACTGGTTATAAACCTGGTCCGGGGAATGGAAGGTTCTAGACTGGGTACTGTATGCCTCCCGAGttgcacagtggtctaagacactgcatctcagtgctagtggCATCccagactgtatcacaactggccatgatcaggagtaccatagggcggcgcacaattggcccagcgtcgtccgggttaggggagggtttggccagggtaggccgtcattgtaaataagaatttgttattaactgacatgcctgattaaatatatttttttgcagcTATATGTGGGTGTGGCCATGTGTCACATGCTGACAGTGTGGTGGGGGGTGCTGGTGGTGTAGGTGACGGTAGCAGGTTTGGGGGGCCAGTCGGGGTCCTCCTGCAGCTCCTGGGCGACTTGCATGTAGCGCACTCTGGGGGTCTTCCCCTTCCGACAGAACAGCCAGGAGAGGAACGCCGTGCACCAACGC

Function

NR:

description
probable cation-transporting ATPase 13A3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433722 True 2984 lncRNA 0.40 3 31918016 31921125

Neighbor

gene id symbol gene type direction distance location
LOC110508970 LOC106598862 coding downstream 58916 31822142 ~ 31859100 (-)
nilt3 nilt3 coding downstream 154928 31718689 ~ 31763088 (-)
LOC110508968 LOC106598866 coding downstream 202202 31708667 ~ 31761665 (-)
nilt2 nilt2 coding downstream 223863 31679423 ~ 31694153 (-)
thap4 thap4 coding downstream 333820 31576878 ~ 31584196 (-)
LOC110508975 LOC106598852 coding upstream 31074 31952199 ~ 31954935 (-)
LOC110508977 NA coding upstream 39376 31958284 ~ 31967067 (-)
LOC110508978 NA coding upstream 80130 32001255 ~ 32014890 (-)
LOC110508982 NA coding upstream 101932 32023057 ~ 32029225 (-)
LOC110508983 LOC106598841 coding upstream 113698 32034823 ~ 32063453 (-)
G2128593 NA non-coding downstream 7458 31909472 ~ 31910558 (-)
G2128592 NA non-coding downstream 8871 31908494 ~ 31909145 (-)
G2128591 NA non-coding downstream 10138 31907581 ~ 31907878 (-)
G2128590 NA non-coding downstream 10502 31907251 ~ 31907514 (-)
G2128589 NA non-coding downstream 12101 31905272 ~ 31905915 (-)
G2128581 NA non-coding upstream 133 31921258 ~ 31921736 (-)
G2128580 NA non-coding upstream 967 31922092 ~ 31922692 (-)
G2128608 LOC106599183 non-coding upstream 13903 31935028 ~ 31935644 (-)
G2128568 NA other downstream 34876 31882715 ~ 31883140 (-)
G2128242 LOC106584167 other downstream 594652 31319283 ~ 31323364 (-)
G2128216 NA other downstream 673324 31244091 ~ 31244692 (-)
LOC110508928 mrpl34 other downstream 1211471 30705085 ~ 30706591 (-)
asip2b agrp2 other upstream 140924 32062049 ~ 32187519 (-)
LOC110508997 NA other upstream 307281 32228406 ~ 32230258 (-)
G2130393 NA other upstream 1477422 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 2119081 34040206 ~ 34066665 (-)

Expression


Co-expression Network