G2128614


Basic Information

Item Value
gene id G2128614
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 31945164 ~ 31948898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2433758
tgagagacattttatgggatattttatttcagctcatgaaacatgggacccactttacatgttgtgtttatacttttGCTCAGTGTATAATTGAAAACAACAAGAAAAATATTGAAATGGGGAATCTCCATTGAGATACAACAAAGCATGGGTTGCATGCATAATAACAAACACTCCATCTGGAGTGTCCCAAGTGTCACAAACAAAACCAGGATCTCCATTATCAGAGCAGGTCCCTCAGGTCCCTCTGTCCAGGGCTGCAGATTCATTCTTCCTCATAATTTGATAATAAGAAGCTTAAATTCTCTTGTTATCCTCCCacagaggagactgggtgaagAGCGGTGCAGCTAGAAGAGATTACCATTTGGGTCTGCTCTCCTCGTCCACTTAACATCGGCATCAGGTCAGCATGTTCCTAATTTGGTCAGCGACACTCATTGTCTCATGCCTTGGGCGTTTGGATGCATAAAGTGGGAGTAATATTAACCTCCATGAATGAAAGGCTATAACTGCCACAGAGGCTATAACTGCCCCAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGGCTACAACTGCACCGGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGGCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGGCTACAACTGCCCCAGAGGCAACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGGCAACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACtgccccagagtctacaacaGCCCCAGACACTGCACCGGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCACCGGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGGCTACAACTGCACCGGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCACCGG
>TU2433759
tgagagacattttatgggatattttatttcagctcatgaaacatgggacccactttacatgttgtgtttatacttttGCTCAGTGTATAATTGAAAACAACAAGAAAAATATTGAAATGGGGAATCTCCATTGAGATACAACAAAGCATGGGTTGCATGCATAATAACAAACACTCCATCTGGAGTGTCCCAAGTGTCACAAACAAAACCAGGATCTCCATTATCAGAGCAGGTCCCTCAGGTCCCTCTGTCCAGGGCTGCAGATTCATTCTTCCTCATAATTTGATAATAAGAAGCTTAAATTCTCTTGTTATCCTCCCacagaggagactgggtgaagAGCGGTGCAGCTAGAAGAGATTACCATTTGGGTCTGCTCTCCTCGTCCACTTAACATCGGCATCAGGTCAGCATGTTCCTAATTTGGTCAGCGACACTCATTGTCTCATGCCTTGGGCGTTTGGATGCATAAAGTGGGAGTAATATTAACCTCCATGAATGAAAGGCTATAACTGCCACAGAGGCTATAACTGCCCCAGTCTACAACTGCCCCAGAGTCTACAACTGCCCCAGAGTCTACAACTGCACCGGAGTCTACAACTGCCCCAGAGGCAACAACTGCCCCAGAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2433758 False 1053 TUCP 0.50 2 31945164 31948302
TU2433759 True 629 lncRNA 0.45 3 31945164 31948898
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110508974 LOC106599183 coding upstream 9358 31933762 ~ 31935806 (+)
LOC110508972 LOC106598853 coding upstream 24216 31880157 ~ 31921755 (+)
LOC110508971 LOC100195537 coding upstream 70435 31870378 ~ 31874729 (+)
LOC110508969 LOC106598864 coding upstream 141111 31794423 ~ 31804053 (+)
LOC118944877 NA coding upstream 169124 31771805 ~ 31776040 (+)
cldn1 LOC106598850 coding downstream 8737 31957635 ~ 31961212 (+)
LOC110508980 bcl6 coding downstream 66248 32015146 ~ 32020881 (+)
LOC110508981 LOC106598847 coding downstream 80691 32029589 ~ 32032860 (+)
LOC110508984 NA coding downstream 104333 32053231 ~ 32055655 (+)
LOC110508986 LOC106598840 coding downstream 138754 32087652 ~ 32098796 (+)
G2128456 NA non-coding upstream 22415 31922097 ~ 31922749 (+)
G2128516 NA non-coding upstream 62067 31882752 ~ 31883097 (+)
G2128482 LOC106598862 non-coding upstream 117321 31826074 ~ 31827843 (+)
G2128653 NA non-coding downstream 85923 32034821 ~ 32037428 (+)
G2128680 NA non-coding downstream 126097 32074995 ~ 32075781 (+)
G2128693 NA non-coding downstream 142007 32090905 ~ 32091522 (+)
G2128668 LOC106598832 non-coding downstream 208137 32157035 ~ 32192779 (+)
G2128744 NA non-coding downstream 237955 32186853 ~ 32237899 (+)
G2128189 NA other upstream 205094 31739312 ~ 31740070 (+)
LOC110508221 LOC106598877 other upstream 301702 31594783 ~ 31643462 (+)
G2127299 LOC106598972 other upstream 1303921 30640687 ~ 30641243 (+)
kcnn1a LOC106598974 other upstream 1376586 30534338 ~ 30592397 (+)
G2126497 NA other upstream 1733531 30210247 ~ 30211633 (+)
G2128753 NA other downstream 320420 32269318 ~ 32274380 (+)
pfn2l LOC106598797 other downstream 682391 32631289 ~ 32700844 (+)
G2129371 crb1 other downstream 800030 32748928 ~ 32749568 (+)
zbtb41 zbtb41 other downstream 834970 32759166 ~ 32803922 (+)

Expression

G2128614 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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G2128614 Expression in each Bioproject

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G2128614 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network