G2129017


Basic Information

Item Value
gene id G2129017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32310876 ~ 32311370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2434300
aacattcagagacttgtcccgaagccacttctgcattgtcttagatgtgtgcttagggtcattgttctgctgaaaggtgaacctttgtcccagtctgaggtcctgagcaggttttcatcgaggatcgctccattcatctttcccacaatcctgactagtctcccagtccctgccattgaaaaacatccccacagcatgatgcttcacctaagggatggtaccaggtttcttccagacgtgacacctggaatttaggccaaagagttcaatctttgttttatcagaccagagaatcttgtttctcatggtcatgtgccttttgtcaaactccaagtggtctgagatgtggcttccgtctggccaccttattggtagagtgctgcagagatgatcaatggaaacaggatgcacctgagctcaatttcgaatgtcatagcgaagggtctgaatgtttatgtaaataaggttattttctttgctttgtcattatggggt

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2434300 True 495 lncRNA 0.45 1 32310876 32311370

Neighbor

gene id symbol gene type direction distance location
LOC110509000 b3gnt5 coding downstream 18683 32280903 ~ 32292193 (-)
dcnl1 LOC106598823 coding downstream 43858 32263643 ~ 32267018 (-)
ccdc39 ccdc39 coding downstream 47446 32244116 ~ 32263430 (-)
LOC110508996 NA coding downstream 67291 32240882 ~ 32243585 (-)
LOC110508997 NA coding downstream 80618 32228406 ~ 32230258 (-)
LOC110509001 LOC106598815 coding upstream 701 32312071 ~ 32332419 (-)
LOC110509003 LOC106598805 coding upstream 150814 32462184 ~ 32514866 (-)
cpdp LOC106598802 coding upstream 287058 32598428 ~ 32614539 (-)
LOC110509006 LOC106598799 coding upstream 316930 32628300 ~ 32655443 (-)
ahsg2 LOC106598792 coding upstream 388668 32700038 ~ 32704296 (-)
G2129044 NA non-coding downstream 1249 32309410 ~ 32309627 (-)
G2129041 NA non-coding downstream 5314 32305299 ~ 32305562 (-)
G2129038 NA non-coding downstream 13482 32297193 ~ 32297394 (-)
G2129021 NA non-coding downstream 42844 32267707 ~ 32268032 (-)
G2129060 NA non-coding upstream 49972 32361342 ~ 32361579 (-)
G2129095 NA non-coding upstream 63295 32374665 ~ 32375095 (-)
G2129099 NA non-coding upstream 68431 32379801 ~ 32425441 (-)
G2129103 LOC105028918 non-coding upstream 88083 32399453 ~ 32402732 (-)
G2129919 NA non-coding upstream 193966 32505336 ~ 32505871 (-)
asip2b agrp2 other downstream 145854 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 282318 32023057 ~ 32029225 (-)
G2128568 NA other downstream 427736 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 573384 31708667 ~ 31761665 (-)
G2130393 NA other upstream 1087177 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1728836 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1730068 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1730199 34038788 ~ 34058344 (-)
G2131621 NA other upstream 2174499 34485869 ~ 34486176 (-)

Expression


Co-expression Network