G2129103 (LOC105028918)


Basic Information

Item Value
gene id G2129103
gene name LOC105028918
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32399453 ~ 32402732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2434400
AGAAACACATACCATGTAATTTGGTAAAAACTGGCAAACAACTGACTAATAAAATGATATGTATGCAATGAGAAAACTGCAGAATCCACACTTAAAAAAGGGTAGTTGTCAGGGAAGGCAAAACCACAAATTCACCTGTTACACTTTTATTTTATTGAtcttaaacaactttactgattAGGGAGTTCATATGACATAGAATGCTGGGGAAGTCTGGAATAGGGTCAAATCTATACATACTTGTATTCTGAAAATATAGGATGAAGCAAATTCCAagtcaccaaaaaaaaaaaaaagaaatctacGGTAGTTCCAAACGCTTTCTGAAAATGTCTGGTTAGATCTGAAGAAAAAACTAAAGTGTAAGGCAGGGTACAAGaggctctttttttttttaacagttcTTCCGTTCTTCCAGAGTCATCCTGTGAGGGAAGAAATCGGTGATACTGTCAGTGCATAATTGTGCATTCGTCTTCTGTGTACTGTCTTGTCTGTACAGTTGATAAGACATCTTTAATGCTGTGTATATGATTAGATACTCCCATCGACTCTACTTTGCAGTACAGTACATAAAGATCACAAATTGCATAGTGTAACAGAACTATAACATTGCACATCCATTTTGCCCCCATTTCCCTTTAAAAATACAACcctgaaaaaacaacaaaacgaagaGGATGAATTCAATGAATTTACAGTTACAGGATAAATCTACAGTTATTTTCTGTCGGTCATCGTAAACTTCTGTGTTGCATCCAACTGGGTGCTGGACGGCAGCCATTTTACTCCAGAACGCTGCACACGCATCATAATACTGATGGACAAACAAATACTGTAGAGATCAGTGCTACAAAGGAGATACACAGGGATTGGAATAGTAGTGACTCATGGTTAGACTGATAAGTCCGATGTAGTaggggagatatatatatatatatatatatatatatatatagtactttGGCTCAGTAGAAAATGAAGACTAAAAAGGAATAATGTATGCATACAAGACCATTGGGATACTTCTGTACAAAATCTCAAACTTTGAGGTCACGAAACATGACCGTTTCCatctgtggagggggggggggggacaagatGTGTGATCATCAATTGAGATCTAACACGATTTGTCAGTTCTCTTCGCTAGTCTTAGAGTTGACAGTAGACGATGAAAAGGACATCCTAGTGTCTGTCAACCATCCATCACTGGGAATTAACAATGCTGGTGGTATTCTGGGTCGTGTTCAATGGGCACCAAGAGGAAGAAAACATgattgaaagagaaagagactgacaagatttgtccaataagaatttttgttttgttttccgtATCAATCCATTTTCCGTTGCGTGCCCTGGGCAGGTCTTTACGGTATCCTGGTGTGTTAGCAAGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTTACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTAAGCAGGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCCTTCACAGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAAGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGTCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCCTTCACGGTATCCTGGTGTGTTAGCAGGACATGACCCTGGGCAGGCTTTGATATAGGAAGAAAAAAAACGGGCATCATATCGGTATCGGCTGATAATACAATAGATCGCTTTCATCTTACAAATGACATAACTTTTGCAAAATGGCTGTTTACAATCGTGGTTGTTCCCCTAATTTTACAAAGAGAAAACTGTGGCTATATTGCCATACCAATATGAGAAAGATAATGTCCAGTAAATATGATTATCGCATCAGTCCGTCATTTCCCTATCGATGCATCCCTAATATCCACTTTTGGCGCCTCCTAGTGGATGGTGTACAGATGTGCATTTCCCTCAGAGCTCAGAAGTTAGCAGATGATGTAGCGATCCGTTCTAGCCTCTCAATTCAGTCAATGGTTTCTATCCATTCATAGCTCCATCCGTGAACGCTAGTGTTGTCCGCTCTGCTATCTCAGCTCATGGCATGCTTAGTTGGCGGATGGTGCAGAGATCCGCTCTAGTCTCTCCGTTGACACACAGTCCAGGCGGATGATGTAAAGATCCGCCCTCGTCCTCTCTGCGTTGCTGCTACTCTCCGGGCAGATGGCCCCATCTCAGTTCATGGCGTGCTGGCGGATTGTGTGGAAGATCCAGTCCATCTTGGTGGTCCAGCCGCCGTGGTGGGCGTCGTTCATCTGCTTCATAAAgtagtccagagcctcctgctcCGTCTTGTCCAGCGCCAGGGTCTTGCGGATGTAAGCGATGTCGTCGAAGGACTGCAGTTCGGGCATCCCCGAGCCCAGCATCATGGAAAACAGGTTGATGAAGAGGTTGGCGTGCTGCCGGATGGCCAGGTAGGCCTTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2434400 True 2958 lncRNA 0.46 2 32399453 32402732

Neighbor

gene id symbol gene type direction distance location
LOC110509001 LOC106598815 coding downstream 67034 32312071 ~ 32332419 (-)
LOC110509000 b3gnt5 coding downstream 107260 32280903 ~ 32292193 (-)
dcnl1 LOC106598823 coding downstream 132435 32263643 ~ 32267018 (-)
ccdc39 ccdc39 coding downstream 136023 32244116 ~ 32263430 (-)
LOC110508996 NA coding downstream 155868 32240882 ~ 32243585 (-)
LOC110509003 LOC106598805 coding upstream 59452 32462184 ~ 32514866 (-)
cpdp LOC106598802 coding upstream 195696 32598428 ~ 32614539 (-)
LOC110509006 LOC106598799 coding upstream 225568 32628300 ~ 32655443 (-)
ahsg2 LOC106598792 coding upstream 297306 32700038 ~ 32704296 (-)
LOC110509013 crb1 coding upstream 333416 32736148 ~ 32751440 (-)
G2129095 NA non-coding downstream 24358 32374665 ~ 32375095 (-)
G2129060 NA non-coding downstream 37874 32361342 ~ 32361579 (-)
G2129017 NA non-coding downstream 88083 32310876 ~ 32311370 (-)
G2129044 NA non-coding downstream 89826 32309410 ~ 32309627 (-)
G2129041 NA non-coding downstream 93891 32305299 ~ 32305562 (-)
G2129919 NA non-coding upstream 102604 32505336 ~ 32505871 (-)
G2129998 NA non-coding upstream 162273 32565005 ~ 32565208 (-)
G2130055 NA non-coding upstream 316505 32719237 ~ 32720885 (-)
G2130058 NA non-coding upstream 321239 32723971 ~ 32724470 (-)
G2130060 NA non-coding upstream 322562 32725294 ~ 32725766 (-)
LOC110508997 NA other downstream 169239 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 234431 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 370895 32023057 ~ 32029225 (-)
G2128568 NA other downstream 516313 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 661961 31708667 ~ 31761665 (-)
G2130393 NA other upstream 995815 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1637474 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1638706 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1638837 34038788 ~ 34058344 (-)
G2131621 NA other upstream 2083137 34485869 ~ 34486176 (-)

Expression


Co-expression Network