G2129919


Basic Information

Item Value
gene id G2129919
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32505336 ~ 32505871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435352
GAAGAAGGATGGAGAGTTTGCATTAATGAGCTGTTGCAGAGAGCAACAGCATACAAATATTGAGAGAGGGCAATCAGAGGGAGAATGAGATAGTGAAAGGGGACGAGATAGTGAGGCGAGAAAGCAAGATAGTGGGAGAGAGAATCCTTTTGGAAGGTTTGTAAAGGAGAAATAGattgtgagggagagagagagagtgtgtgagagagactttTTGGAGGGTTTGTAAAGGAGAAAGAGattgtgagggggagagagagagtgtgtgagagagactctTTTTGGAGGGTTTGTAAAGGAGAAAGAGAttttgagggggagagagagagtgtgtgag
>TU2435353
GAAGAAGGATGGAGAGTTTGCATTAATGAGCTGTTGCAGAGAGCAACAGCATACAAATATTGAGAGAGGGCAATCAGAGGGAGAATGAGATAGTGAAAGGGGACGAGATAGTGAGGCGAGAAAGCAAGATAGTGGGAGAGAGAATCCTTTTGGAAGGTTTGTAAAGGAGAAATAGattgtgagggagagagagagagtgtgtgagagagactttTTGGAGGGTTTGTAAAGGAGAAAGAGCttttgagggggagagagagagtgtgtgagagagactctTTTTGGAGGGTTTGTAAAGGAGAAAGAGAttttgagggggagagagagagtgtgtgagagagactTTTTGGAGGGTTTGTAAAGGAGAAAGAGAttttgagggggagagagagagtgtgtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435352 False 337 lncRNA 0.45 2 32505336 32505871
TU2435353 True 402 lncRNA 0.45 2 32505336 32505871

Neighbor

gene id symbol gene type direction distance location
LOC110509001 LOC106598815 coding downstream 172917 32312071 ~ 32332419 (-)
LOC110509000 b3gnt5 coding downstream 213143 32280903 ~ 32292193 (-)
dcnl1 LOC106598823 coding downstream 238318 32263643 ~ 32267018 (-)
ccdc39 ccdc39 coding downstream 241906 32244116 ~ 32263430 (-)
LOC110508996 NA coding downstream 261751 32240882 ~ 32243585 (-)
cpdp LOC106598802 coding upstream 92557 32598428 ~ 32614539 (-)
LOC110509006 LOC106598799 coding upstream 122429 32628300 ~ 32655443 (-)
ahsg2 LOC106598792 coding upstream 194167 32700038 ~ 32704296 (-)
LOC110509013 crb1 coding upstream 230277 32736148 ~ 32751440 (-)
LOC110509017 LOC106599177 coding upstream 280035 32785906 ~ 32788215 (-)
G2129099 NA non-coding downstream 79895 32379801 ~ 32425441 (-)
G2129103 LOC105028918 non-coding downstream 102604 32399453 ~ 32402732 (-)
G2129095 NA non-coding downstream 130241 32374665 ~ 32375095 (-)
G2129060 NA non-coding downstream 143757 32361342 ~ 32361579 (-)
G2129017 NA non-coding downstream 193966 32310876 ~ 32311370 (-)
G2129998 NA non-coding upstream 59134 32565005 ~ 32565208 (-)
G2130055 NA non-coding upstream 213366 32719237 ~ 32720885 (-)
G2130058 NA non-coding upstream 218100 32723971 ~ 32724470 (-)
G2130060 NA non-coding upstream 219423 32725294 ~ 32725766 (-)
G2129953 NA non-coding upstream 221906 32727777 ~ 32732290 (-)
LOC110508997 NA other downstream 275122 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 340314 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 476778 32023057 ~ 32029225 (-)
G2128568 NA other downstream 622196 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 767844 31708667 ~ 31761665 (-)
G2130393 NA other upstream 892676 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1534335 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1535567 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1535698 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1979998 34485869 ~ 34486176 (-)

Expression


Co-expression Network