G2130058


Basic Information

Item Value
gene id G2130058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32723971 ~ 32724470 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435509
attggctgggcctggctcccaagtgggtgtgccCTCCAAAGCCCCTGCCCAATCatgggaaatccatagattagggcctaattaatttttttaaatggactgatttccttatatgaactgtaagtcagtaaaatcattgaaattgttgcatgtttcttTTATATTTTTGATGAATATAAATCTATTGAGAAGATAGACAGCAGAATGACTTAGGGCTATGACCTTTGACCCTCTGCAACTTTCTCACACATCATTATTCAAGATTCATTCAAAATATTCCATAATCATTGTGGTATTAACATAAATTtaaaagtgtttagaaacatattatattcttatttacaataaaattgACTCCAAAACAACACAattcattatttaccattaatttctattgggcacaataTCATCTGAAGCACAACAAAAactaactgcaaatgcatccaacatgtTTGTAGAGTCATAAGCgtaatgtagtcattgcgtgctaggaatatggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435509 True 500 lncRNA 0.34 1 32723971 32724470

Neighbor

gene id symbol gene type direction distance location
ahsg2 LOC106598792 coding downstream 19675 32700038 ~ 32704296 (-)
LOC110509006 LOC106598799 coding downstream 68528 32628300 ~ 32655443 (-)
cpdp LOC106598802 coding downstream 109432 32598428 ~ 32614539 (-)
LOC110509003 LOC106598805 coding downstream 209105 32462184 ~ 32514866 (-)
LOC110509001 LOC106598815 coding downstream 391552 32312071 ~ 32332419 (-)
LOC110509013 crb1 coding upstream 11678 32736148 ~ 32751440 (-)
LOC110509017 LOC106599177 coding upstream 61436 32785906 ~ 32788215 (-)
LOC118944826 LOC106597593 coding upstream 65683 32790153 ~ 32795726 (-)
LOC110509016 LOC106597593 coding upstream 73639 32798109 ~ 32803677 (-)
LOC110509015 LOC106597593 coding upstream 81055 32805525 ~ 32812024 (-)
G2130055 NA non-coding downstream 3086 32719237 ~ 32720885 (-)
G2129998 NA non-coding downstream 158763 32565005 ~ 32565208 (-)
G2129919 NA non-coding downstream 218100 32505336 ~ 32505871 (-)
G2129099 NA non-coding downstream 298530 32379801 ~ 32425441 (-)
G2129103 LOC105028918 non-coding downstream 321239 32399453 ~ 32402732 (-)
G2130060 NA non-coding upstream 824 32725294 ~ 32725766 (-)
G2129953 NA non-coding upstream 3307 32727777 ~ 32732290 (-)
G2130086 NA non-coding upstream 97556 32822026 ~ 32822820 (-)
G2130088 NA non-coding upstream 99923 32824393 ~ 32825566 (-)
G2130089 NA non-coding upstream 101662 32826132 ~ 32826947 (-)
LOC110508997 NA other downstream 493757 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 558949 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 695413 32023057 ~ 32029225 (-)
G2128568 NA other downstream 840831 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 986479 31708667 ~ 31761665 (-)
G2130393 NA other upstream 674077 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1315736 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1316968 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1317099 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1761399 34485869 ~ 34486176 (-)

Expression


Co-expression Network