G2130088


Basic Information

Item Value
gene id G2130088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32824393 ~ 32825566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435541
TCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTTCATCCGCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTCTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTCTTTCATCCTCTAAGGCTTTCATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTCTTACATCCTCTAAGGCTTTCATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGG
>TU2435543
TCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTTCATCCGCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGTTTACATCCTCTAAGGCTTACATCCTCTCTTACATCCTCTAAGGCTTTCATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGGCTTACATCCTCTAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435541 False 478 lncRNA 0.42 3 32824393 32825566
TU2435543 True 386 lncRNA 0.42 3 32824393 32825566

Neighbor

gene id symbol gene type direction distance location
LOC110509015 LOC106597593 coding downstream 12369 32805525 ~ 32812024 (-)
LOC110509016 LOC106597593 coding downstream 20716 32798109 ~ 32803677 (-)
LOC118944826 LOC106597593 coding downstream 28667 32790153 ~ 32795726 (-)
LOC110509017 LOC106599177 coding downstream 36178 32785906 ~ 32788215 (-)
LOC110509013 crb1 coding downstream 72953 32736148 ~ 32751440 (-)
LOC110509019 cdc73 coding upstream 49873 32875439 ~ 32919614 (-)
ro60 trove2 coding upstream 94354 32919920 ~ 32937170 (-)
LOC110509023 LOC106598560 coding upstream 118976 32944542 ~ 32948512 (-)
rgs1 rgs1 coding upstream 129384 32954950 ~ 32957306 (-)
LOC110508225 LOC106598102 coding upstream 136930 32962496 ~ 32964152 (-)
G2130086 NA non-coding downstream 1573 32822026 ~ 32822820 (-)
G2129953 NA non-coding downstream 92103 32727777 ~ 32732290 (-)
G2130060 NA non-coding downstream 98627 32725294 ~ 32725766 (-)
G2130058 NA non-coding downstream 99923 32723971 ~ 32724470 (-)
G2130055 NA non-coding downstream 103508 32719237 ~ 32720885 (-)
G2130089 NA non-coding upstream 566 32826132 ~ 32826947 (-)
G2129964 NA non-coding upstream 4451 32830017 ~ 32835141 (-)
G2129961 NA non-coding upstream 45384 32870950 ~ 32872918 (-)
G2130162 NA non-coding upstream 187813 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 280306 33105872 ~ 33107219 (-)
LOC110508997 NA other downstream 594179 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 659371 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 795835 32023057 ~ 32029225 (-)
G2128568 NA other downstream 941253 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1086901 31708667 ~ 31761665 (-)
G2130393 NA other upstream 572981 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1214640 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1215872 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1216003 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1660303 34485869 ~ 34486176 (-)

Expression


Co-expression Network