G2129964


Basic Information

Item Value
gene id G2129964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32830017 ~ 32835141 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435403
AAACACATAACGTATTTTGTTCCAGGCCTTGGAAATACAACTCGCAATCCCCTAAAAAACATCGCTCCCCATGTGTGGGGTCTCTCACCGCAAGCCGTGGCCCAGAGCCCAAGGCTTTTCATCCTGTTGCTGACCAGCTCGTCCAGCTCCTGTCTCTCCGAGCGTCTGGCCCTCAGACCCCGCTGGCCCCCCCTCTGAGCCCCCCGCTGGTTCCCTCGAGTCCCCCTCCGGCTCAGCTTCCGCGCCCACTGCACGCTCTTCCTCCTCAGCAGGGGAGCCTTCCCGTCCGATGGGTCGCTGGAGGTGGAGGTGTGGTGGAGCCCTCCGGCCACAGGGGGGAGTTCTCGGTCTCTCTGCTCCTTGGGGTCGTCTAAGTCCTCCACGCACCCGAGAGCTGTGACTGAGTACGATCAAAACACAATGCCATATACATGAATGAAGTCTATGGTGTGTCTATAGTCAAATAGGCTCAAATGAAACGACCCAGAACAAAGCGAATAATCAAGAGTGAGGCCAGAGAATGTATAAGTTGATTTGACAATGATTTCTTCCTGATATAACCACCAGTGGCAAGTCTCGACGTGGTTTATCAAGCACAATTTAACCAAGACACATTACAGAGGAAGAAAACCTACCTCATCTGCACAAAAAGTTGATTCAGTCTGACAAAATAAATCTACTGTTTTTCGCGAATCATGGAATCCCACAAATAGGAATCATGGAATCACACAAATAGGAATCATGGAATCACACAAATAGGAGTCGTGGAATCACACAAATAGGAGTCGTGGAATCACACAAATAGGAATCGTGGAATCACACAAATAGGAATCATGGAATCACACAAATTGGGCTGAACTTACTTGGGAGGATGGCTCGCATTGCTTATGATGGAGAATGAAAAGAAAAGAGATGAATGACATTAATGTTGCTTACTGTGTTGTAACATGCTTAAATAACCATGAAAGCATACAGACTAAACATTTATACGTAACAaatgagaaaaaaagaagaaaaacacacacacacaacagaatgACAGCATAATCAATGCCGCTGTTATATGTAATTAACACAAGAAAAAAGAAAACACGAAACTGGGATTTCACAGCCAAACAAATGAATGTCAACAATGTTAAAACAGCCTTGCGGTCTAGAGGGCACCTCCTCAGAGGAATCTGCTGTCTGGGACTCAGTCCTGTAGATGCTGATAGAGCCTTCCATATGTCTGGATCCACAGGTCATCCTCAGAGATCTGCATCTAAAAGGTCATTTCAAAGTCCATTTCTCTACAGGAGGAACAACTGTACAGTGATTTTAAATGACTGTGGAGTCACTTTTACCTGTCAGTGTAAGGATTAGGACAGGCAAGTAAAGGCTGCTGTGCTGTCACACATAGGACCACTGTACAGTACAACGGGTgaatctcagtagtctaaagacGCCTCCTCTCTTTGTCTTCTTTCTCCTTCTGCCTGAGACGTGGAGAGGAAACCACTTTTGACCATTGAGATGCACCCAGAGAGTAACTCACAGAGCAGAGGAATCCAGAGCCTGGGGTGGTATCCAGGCCCAGCAGCAGCCTGGTGATGGAGATAATATAGTCTTTGACAAACGACTGGGCtggcagacaggacaggacaggacaggacaggacatagaAGGGTCATTCCTGGTCATCCAGAAATCAACACATTCCAATTCGACTAGCATTATATTATATGGACATTGGGATGCATATGAACACATTGTGACAGAAAAAATAATGTTACATGTTTTAACATAAAATATCTGGGAGGTACAAAATTGTGTAATAAATAACTATAATTACTACAGTACATGCCCTTAAGCAAAGTCAGTCTGTGCCACAGAGATAACCTTGTTTAAATAAGCCTTGGTAGGCTAATTAAAGAGATTAGCCTCTGTAGGCCAATTAAATAACAATATTATTAAagaggtatcctagtggttagagcgttggactagtaaccgaaaagttgcaagatcgaatctccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggatgtcactgaaaataagaatttgttcttaactgacttgcctagttaaataaagttttttttaaaggatAATTAAAGAGATTAGCCTCGGTAGGCTAATTAAAGAGATTACCTTCTGTATACAGTACAGAACAACCTCTacttaaaaatgtatgtagttaaGCAGTAAGTAACATTCTTATCTTCTCTGCTGCTGTATAGAACAGGTGGGTCCTGCTGTATAGAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCAGCTGTATAAAACAGGTGGATCCTGCTGTACATAACAGgtgggtcctgctgtacataACAGGTGGGTCCAGCTGTACAGAACAGGTGGGTCCTGCTGTATAGAACAGGTGGGTTGTGCTGTACAGAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCTGCTGTGCAGAACAGGTGGGTCGTGCTGTACAGAACAGATGGGTCCAGCTGTACAGAACAGGTGGGTCCTGCTGTTCAGAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCAGCTGTACAGAACAGGTGGATCATACTGTACAGAACAGGTGGATCATACTGTACAAAACAGGTGGATCATACTGTACAGAACAGGTGGATCATACTGTACAAAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCAGCTGTACAGAACAGGTGGGTCCTGCTGTAGAGAACAGGTGGGTCCTGCTGTACAGAACAGGTGGGTCCTGCTGTACAAAACAGGTGGGTCCTGCTGTACAGAACAGGTGGATCCTGCTGTACAGAACAGGTGGGTCCTGCTGTACAGAACAGGTCAATGTCATCACATTGAATTATTTGGACGAGATAAAGTGGAATACATtttattcaaccagtttttgcccagtgggatgttaGGGCAGCATTCTGCAAACCTTTCCTTGAATAAACCAGTCTATTGCATTACAGTATAACCGGATTCAACTGGTCACCTAATCATCAAGTCCTTCGGGTGTTACAACTGGAACGGATCAAATGGGGGTGCTCAAGAAGAGGTTAGGATATTTGAAAGAGAGAGACCGCCACCTGGTGGTCGATACTGATACGAGATGGAAGATGCACCGCAACAGGATATTTGAAAGAGAGAGACCGCCACCTGGTGGTCGATACTGATACGAGATGGAAGATGCACCGCAACAGGATATTTGAAAGAGAGAGACCGCCACCTGGTGGTCGATACTGATACGAGGTGGAAGATGCACCGCAACGGGAACGATATTGATATCTTATTAAGGAAAGGATGCCTACGCATAACATAATACCCGTCATATTACCCCTGAAAATGTTACATGTCACATGTGTCTATGAATGGGAAAAATCATTTCTCTTAGAAAAAAATATCCAACGTCTGGTGTTGTTTGAGAGGCTGTGGAAAAATACTATgcttgtactgtatgtactgtccAGTCTTCACATAATGATTGTTTAACCTTCTCTTCCTTTGCTTTGAAGATGACTCAATGTATAGTTAGTAGCCTTTGGAGACGACTCAATGTATATTTcgtaccagggttggggtcaattccatttcaattccagtcaattcagaaagtaaccCAAATTCCAATTATACATTTTTctaattgaaaagcattaaaGATCATTTCAGTTTCAGTCTACTTCCtcaattgactggaattgactccaaccctggtccATAGCCTTTGCTACTGCAGACAAGGATAACTAGTTGTTAACTGCATTTATAGAGCTAGAGACATCTACTGGGCTGGGAAGGCGTATTTAAGAGCGGTGTACTGAACAGTCGACAACACGCCTTTTAACTTACGCTTGAGTTGACATCTTCCGGGGACATtgcttttaaaatgctaattgtCAGCTGTCAAGTGTCTTTCTCTATAACGCGCCTTGGACTGAAACTCGGCCTTGAAGTACAGATGGTGTGCATTCAGTGACGGCTTACCTTCTCCAGTttagagagagccagagagtacCAGTCCTTAGCTCTGACCTGCATAAACCTCATGTTGGCGGGGTGGGTTAGCTCGGTGATGATACTGAGACTGGAGAACAACCTGGATGAGAAGAAAC

Function

NR:

description
potassium channel subfamily T member 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435403 True 4205 lncRNA 0.45 3 32830017 32835141

Neighbor

gene id symbol gene type direction distance location
LOC110509015 LOC106597593 coding downstream 17993 32805525 ~ 32812024 (-)
LOC110509016 LOC106597593 coding downstream 26340 32798109 ~ 32803677 (-)
LOC118944826 LOC106597593 coding downstream 34291 32790153 ~ 32795726 (-)
LOC110509017 LOC106599177 coding downstream 41802 32785906 ~ 32788215 (-)
LOC110509013 crb1 coding downstream 78577 32736148 ~ 32751440 (-)
LOC110509019 cdc73 coding upstream 40298 32875439 ~ 32919614 (-)
ro60 trove2 coding upstream 84779 32919920 ~ 32937170 (-)
LOC110509023 LOC106598560 coding upstream 109401 32944542 ~ 32948512 (-)
rgs1 rgs1 coding upstream 119809 32954950 ~ 32957306 (-)
LOC110508225 LOC106598102 coding upstream 127355 32962496 ~ 32964152 (-)
G2130089 NA non-coding downstream 3070 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 4451 32824393 ~ 32825566 (-)
G2130086 NA non-coding downstream 7197 32822026 ~ 32822820 (-)
G2129953 NA non-coding downstream 97727 32727777 ~ 32732290 (-)
G2130060 NA non-coding downstream 104251 32725294 ~ 32725766 (-)
G2129961 NA non-coding upstream 35809 32870950 ~ 32872918 (-)
G2130162 NA non-coding upstream 178238 33013379 ~ 33019915 (-)
G2130229 NA non-coding upstream 270731 33105872 ~ 33107219 (-)
G2130236 NA non-coding upstream 286025 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 296455 33131596 ~ 33131887 (-)
LOC110508997 NA other downstream 599803 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 664995 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 801459 32023057 ~ 32029225 (-)
G2128568 NA other downstream 946877 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1092525 31708667 ~ 31761665 (-)
G2130393 NA other upstream 563406 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 1205065 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 1206297 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 1206428 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1650728 34485869 ~ 34486176 (-)

Expression


Co-expression Network