G2130229


Basic Information

Item Value
gene id G2130229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33105872 ~ 33107219 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435704
acattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtgctcCCTGTctatacctctgcacattgatctggtactccctgtatatacctctgcacattgatctggtacttcctgtttatacctctgcacattgatctggtactccctgtctatacctctgcacattgatctggtactccctgtatatacctctgcacattgatctggtacttcctgtttatacctctgcacattgatctggtactccctgtatatacctctgcacattgatctggtactcccagtttatacctctgcacattgatctggtactccctgtctatacctctgcacattgatctggtactggtactccctgtatatacctctgcacattgatctggtactccctgtctatacctctgcacattgatctggtactggtactccctgtctatagatgcacattgatctggtactccctgtatatacctctgcacattgatctggtactggtactccctgtatatacctctgcacattgatctggtactccctgtctatacctctgcacattgatctggtactggtattccctgtctatagatgcacattgatctggtactccctgtctatagctgcacattgatctggtactggtactccctgtctatagctccacattgatctggtactggtactccctgtctatagctccacattgatctggtactggtactccctgtctatagctccacattgatctggtactggtacttcctgtctatagctccacattaatctggtactggtactccctgtctatagctccacattgatctggtactggtacttcctgtctatagctccacattaatctggtactggtactccctgtcgATAGCTACatttttgtgtattttattttattcctcttgtgttagtTCCTGTTTTATTTATTGTTGTTCTTTTTTgaaactctgcatcgttgggaaaggTTCATAAGCAAGCATTACACTGTAATGTcgacaccagttgtattcagtgcat

Function

NR:

description
PREDICTED: uncharacterized protein FLJ40521-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435704 True 1310 lncRNA 0.44 2 33105872 33107219

Neighbor

gene id symbol gene type direction distance location
rgs18 rgs18 coding downstream 132004 32968949 ~ 32973868 (-)
LOC110508225 LOC106598102 coding downstream 141720 32962496 ~ 32964152 (-)
rgs1 rgs1 coding downstream 148566 32954950 ~ 32957306 (-)
LOC110509023 LOC106598560 coding downstream 157360 32944542 ~ 32948512 (-)
ro60 trove2 coding downstream 168702 32919920 ~ 32937170 (-)
LOC118944830 NA coding upstream 42786 33150005 ~ 33153414 (-)
LOC110508227 LOC106598474 coding upstream 171335 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 202784 33310003 ~ 33313291 (-)
LOC110509030 LOC106598456 coding upstream 206214 33313433 ~ 33381200 (-)
LOC110509034 LOC106598452 coding upstream 299454 33406673 ~ 33514461 (-)
G2130162 NA non-coding downstream 85957 33013379 ~ 33019915 (-)
G2129961 NA non-coding downstream 232954 32870950 ~ 32872918 (-)
G2129964 NA non-coding downstream 270731 32830017 ~ 32835141 (-)
G2130089 NA non-coding downstream 278925 32826132 ~ 32826947 (-)
G2130088 NA non-coding downstream 280306 32824393 ~ 32825566 (-)
G2130236 NA non-coding upstream 13947 33121166 ~ 33121566 (-)
G2130241 NA non-coding upstream 24377 33131596 ~ 33131887 (-)
G2130258 NA non-coding upstream 60707 33167926 ~ 33168125 (-)
G2130260 NA non-coding upstream 64111 33171330 ~ 33171579 (-)
G2130267 NA non-coding upstream 71661 33178880 ~ 33179177 (-)
LOC110508997 NA other downstream 875658 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 940850 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1077314 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1222732 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1368380 31708667 ~ 31761665 (-)
G2130393 NA other upstream 291328 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 932987 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 934219 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 934350 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1378650 34485869 ~ 34486176 (-)

Expression


Co-expression Network