Gene
RNA
| Item | Value |
|---|---|
| gene id | G2129559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33166118 ~ 33166591 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2434906 | False | 474 | lncRNA | 0.37 | 1 | 33166118 | 33166591 |
| TU2434909 | True | 385 | lncRNA | 0.37 | 1 | 33166207 | 33166591 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509026 | LOC106598516 | coding | upstream | 404 | 33156641 ~ 33165714 (+) |
| LOC110509025 | LOC106598617 | coding | upstream | 39141 | 33124472 ~ 33126977 (+) |
| LOC110509024 | LOC106598521 | coding | upstream | 95711 | 33050612 ~ 33070407 (+) |
| LOC110509022 | b3galt2 | coding | upstream | 254186 | 32872931 ~ 32911932 (+) |
| LOC110508224 | kcnt2 | coding | upstream | 329680 | 32814704 ~ 32836798 (+) |
| LOC110508226 | LOC106598614 | coding | downstream | 10161 | 33176752 ~ 33212483 (+) |
| LOC118944857 | LOC106568727 | coding | downstream | 64931 | 33231522 ~ 33247262 (+) |
| LOC110509029 | LOC106598504 | coding | downstream | 82059 | 33248650 ~ 33274764 (+) |
| LOC118944861 | NA | coding | downstream | 346981 | 33513572 ~ 33520317 (+) |
| LOC110509035 | LOC106598436 | coding | downstream | 360093 | 33526684 ~ 33552442 (+) |
| G2129552 | NA | non-coding | upstream | 11319 | 33154558 ~ 33154799 (+) |
| G2129530 | NA | non-coding | upstream | 59683 | 33105976 ~ 33106435 (+) |
| G2129522 | NA | non-coding | upstream | 73471 | 33091151 ~ 33092647 (+) |
| G2129429 | rgs1 | non-coding | upstream | 208741 | 32954952 ~ 32957377 (+) |
| G2129411 | trove2 | non-coding | upstream | 235495 | 32930072 ~ 32930623 (+) |
| G2129574 | NA | non-coding | downstream | 23407 | 33189998 ~ 33190204 (+) |
| G2129576 | NA | non-coding | downstream | 32815 | 33199406 ~ 33199752 (+) |
| G2129564 | NA | non-coding | downstream | 46123 | 33212714 ~ 33213948 (+) |
| G2129565 | NA | non-coding | downstream | 47498 | 33214089 ~ 33214513 (+) |
| zbtb41 | zbtb41 | other | upstream | 362196 | 32759166 ~ 32803922 (+) |
| G2129371 | crb1 | other | upstream | 416550 | 32748928 ~ 32749568 (+) |
| pfn2l | LOC106598797 | other | upstream | 465274 | 32631289 ~ 32700844 (+) |
| G2128753 | NA | other | upstream | 891738 | 32269318 ~ 32274380 (+) |
| G2129639 | LOC106598496 | other | downstream | 141507 | 33308098 ~ 33308991 (+) |
| G2129708 | NA | other | downstream | 265160 | 33431751 ~ 33432107 (+) |
| G2129724 | LOC106598452 | other | downstream | 285621 | 33452212 ~ 33452873 (+) |
| G2129765 | LOC106598425 | other | downstream | 405517 | 33572108 ~ 33575970 (+) |
| G2129859 | NA | other | downstream | 562557 | 33729148 ~ 33729528 (+) |
