G2130260



Basic Information


Item Value
gene id G2130260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33171330 ~ 33171579 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2435742
caccaatacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatgtaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2435742 True 250 lncRNA 0.39 1 33171330 33171579

Neighbor


gene id symbol gene type direction distance location
LOC118944830 NA coding downstream 17916 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 197462 32968949 ~ 32973868 (-)
LOC110508225 LOC106598102 coding downstream 207178 32962496 ~ 32964152 (-)
rgs1 rgs1 coding downstream 214024 32954950 ~ 32957306 (-)
LOC110509023 LOC106598560 coding downstream 222818 32944542 ~ 32948512 (-)
LOC110508227 LOC106598474 coding upstream 106975 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 138424 33310003 ~ 33313291 (-)
LOC110509030 LOC106598456 coding upstream 141854 33313433 ~ 33381200 (-)
LOC110509034 LOC106598452 coding upstream 235094 33406673 ~ 33514461 (-)
LOC110509036 LOC106598444 coding upstream 347125 33518704 ~ 33526697 (-)
G2130258 NA non-coding downstream 3205 33167926 ~ 33168125 (-)
G2130241 NA non-coding downstream 39443 33131596 ~ 33131887 (-)
G2130236 NA non-coding downstream 49764 33121166 ~ 33121566 (-)
G2130229 NA non-coding downstream 64111 33105872 ~ 33107219 (-)
G2130162 NA non-coding downstream 151415 33013379 ~ 33019915 (-)
G2130267 NA non-coding upstream 7301 33178880 ~ 33179177 (-)
G2130268 NA non-coding upstream 8305 33179884 ~ 33180083 (-)
G2130272 NA non-coding upstream 24294 33195873 ~ 33196078 (-)
G2130275 NA non-coding upstream 32609 33204188 ~ 33205306 (-)
G2130276 NA non-coding upstream 34363 33205942 ~ 33206509 (-)
LOC110508997 NA other downstream 941116 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1006308 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1142772 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1288190 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1433838 31708667 ~ 31761665 (-)
G2130393 NA other upstream 226968 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 868627 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 869859 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 869990 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1314290 34485869 ~ 34486176 (-)

Expression



Co-expression Network