Gene
RNA
| Item | Value |
|---|---|
| gene id | G2130267 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33178880 ~ 33179177 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleotide-binding oligomerization domain-containing protein 2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2435750 | True | 298 | lncRNA | 0.37 | 1 | 33178880 | 33179177 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944830 | NA | coding | downstream | 25466 | 33150005 ~ 33153414 (-) |
| rgs18 | rgs18 | coding | downstream | 205012 | 32968949 ~ 32973868 (-) |
| LOC110508225 | LOC106598102 | coding | downstream | 214728 | 32962496 ~ 32964152 (-) |
| rgs1 | rgs1 | coding | downstream | 221574 | 32954950 ~ 32957306 (-) |
| LOC110509023 | LOC106598560 | coding | downstream | 230368 | 32944542 ~ 32948512 (-) |
| LOC110508227 | LOC106598474 | coding | upstream | 99377 | 33278554 ~ 33307293 (-) |
| dynlt5 | tctex1d1 | coding | upstream | 130826 | 33310003 ~ 33313291 (-) |
| LOC110509030 | LOC106598456 | coding | upstream | 134256 | 33313433 ~ 33381200 (-) |
| LOC110509034 | LOC106598452 | coding | upstream | 227496 | 33406673 ~ 33514461 (-) |
| LOC110509036 | LOC106598444 | coding | upstream | 339527 | 33518704 ~ 33526697 (-) |
| G2130260 | NA | non-coding | downstream | 7301 | 33171330 ~ 33171579 (-) |
| G2130258 | NA | non-coding | downstream | 10755 | 33167926 ~ 33168125 (-) |
| G2130241 | NA | non-coding | downstream | 46993 | 33131596 ~ 33131887 (-) |
| G2130236 | NA | non-coding | downstream | 57314 | 33121166 ~ 33121566 (-) |
| G2130229 | NA | non-coding | downstream | 71661 | 33105872 ~ 33107219 (-) |
| G2130268 | NA | non-coding | upstream | 707 | 33179884 ~ 33180083 (-) |
| G2130272 | NA | non-coding | upstream | 16696 | 33195873 ~ 33196078 (-) |
| G2130275 | NA | non-coding | upstream | 25011 | 33204188 ~ 33205306 (-) |
| G2130276 | NA | non-coding | upstream | 26765 | 33205942 ~ 33206509 (-) |
| G2130277 | LOC106598614 | non-coding | upstream | 27589 | 33206766 ~ 33209118 (-) |
| LOC110508997 | NA | other | downstream | 948666 | 32228406 ~ 32230258 (-) |
| asip2b | agrp2 | other | downstream | 1013858 | 32062049 ~ 32187519 (-) |
| LOC110508982 | NA | other | downstream | 1150322 | 32023057 ~ 32029225 (-) |
| G2128568 | NA | other | downstream | 1295740 | 31882715 ~ 31883140 (-) |
| LOC110508968 | LOC106598866 | other | downstream | 1441388 | 31708667 ~ 31761665 (-) |
| G2130393 | NA | other | upstream | 219370 | 33398547 ~ 33399084 (-) |
| G2130771 | LOC106598333 | other | upstream | 861029 | 34040206 ~ 34066665 (-) |
| G2130780 | LOC106598333 | other | upstream | 862261 | 34041438 ~ 34068073 (-) |
| LOC110509052 | LOC106598333 | other | upstream | 862392 | 34038788 ~ 34058344 (-) |
| G2131621 | NA | other | upstream | 1306692 | 34485869 ~ 34486176 (-) |
