G2130277 (LOC106598614)


Basic Information

Item Value
gene id G2130277
gene name LOC106598614
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33206766 ~ 33209118 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435760
ACTGTGAGCTGAGTTTGTAGGGAGGAGAACTGTCAACAACACTATAGCACTACTGTATATGCTATGACTGAGTGAAGCAGAGCTGTGGAGGGCTACACAGCCATCTCATCATCCAGACAGTCTGAAGGGCTCTCTGCGTTCAGCACGTTGAAGAGGCGTGCCGTGCCCTCAGGCCCCGCCCCCTCTCcctgcccccagctgtccctgTCACTGCTCTCGTCCGTGTTGGACTCGTATTCCGAACCGATCCCCGACTCCCGGAACCGGAGGAGCTCCAGGGCTCCAAGGACCTCCTCTCCACCCACAGGGGAGTCCCCGTCTGGGCCGCCTGAGCTCGGACTCTCCCCCtcctggtcttggttctggtggGGCTCCTCCCCCCTGCGGCGGGGGAAGCGGAAGCACTCCAGCCTCACGGCACTGCCGCCAGGCCCCAGAGAGAGGCTCTCCGGGGCCCTGGTCCCTGGTGGAGAGGACCCTGTTAGGGTGGAGGCCCATGGGCCATTGTTGATCTGGGGCTGACCCTGCTGGGGGCCCATGGAGGTGGGGATGGTGGGGGCGTCACGCAGGGGGGGCTTGGCACGGAAGGTGATCTCCAGCAAACTGTCCTGGGAGCCCACTGTGGAgaaaacagagaagagagagagtgagattgaAAGAGGGATAAATAAGGAaagatacaaataaaataaagacTGAGAATTAGTGGGAATGGAGGAAAGAAGATGagtggagggaatagagagatgagagaggaggtgaTTTGAGGGGATAATTGAGAGCGGAGATTATGATAAACTGGAAAGGGCAAGATGACAGGCAAGATAACAGGCAAGATGACAGGCaggatgagagacaggtaacaggCAAGATGACAGGCaggatgagagacaggtaacaggCAAGATGACAAGAAAGATAACAGGCAGATAACAGGCAAGATGACAGACAGGATGACAGGCAAGATGACAGGCAAGATGACAGGCAAGATGACAGACAAGATGACAGGCAAGATGACAGACAAGATGACAGGCAAGATGACAGGCAAGATGACAGGCAAGATGACAGGTAGGATGACAGGCAAGATGACAGGCAAGATGACAAGCAAGATGACAGGCAGATAACAGGCAAGATGACAGGCAAGATGACAGGCAAGAGGACAGGCAAGAGGACAGGCAGATAACAGGCAAGATGACAGGCAAGATGACAGGCAAGATGACAGGCAAGATGACAGCGTTACTGATAAGCTGTTATGTCAATTCTGATGATTATTAAATACATGACAGTACAGAAAAAGGAGAACAAAAGGATGaaagatgagaggggagagatgggaaaataaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaaaagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaaaagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagtagagaaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgggaaaaTAAACAGGGATGAGGGGGGAGACATGAGACAAGAaacagggatgagaggggagagatgagaagataaacagggatgagaggggagagatgagaagagaaacagggatgagaggggagagatgagaagagaaacGGATGAGAGGGGAGCGATGAGAAGAGAaacagggatgagaggggagagatgagaagagaaaaagggatgagaggggagagatgggaaaaTAAACAGGGATGAGGGGGGAGACATGAGACAAGAaacagggatgagaggggagagatgagaagataaacagggatgagaggggagagatgagaagagaaacagggatgag

Function

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435760 True 2247 lncRNA 0.52 4 33206766 33209118

Neighbor

gene id symbol gene type direction distance location
LOC118944830 NA coding downstream 53352 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 232898 32968949 ~ 32973868 (-)
LOC110508225 LOC106598102 coding downstream 242614 32962496 ~ 32964152 (-)
rgs1 rgs1 coding downstream 249460 32954950 ~ 32957306 (-)
LOC110509023 LOC106598560 coding downstream 258254 32944542 ~ 32948512 (-)
LOC110508227 LOC106598474 coding upstream 69436 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 100885 33310003 ~ 33313291 (-)
LOC110509030 LOC106598456 coding upstream 104315 33313433 ~ 33381200 (-)
LOC110509034 LOC106598452 coding upstream 197555 33406673 ~ 33514461 (-)
LOC110509036 LOC106598444 coding upstream 309586 33518704 ~ 33526697 (-)
G2130276 NA non-coding downstream 257 33205942 ~ 33206509 (-)
G2130275 NA non-coding downstream 1460 33204188 ~ 33205306 (-)
G2130272 NA non-coding downstream 10688 33195873 ~ 33196078 (-)
G2130268 NA non-coding downstream 26683 33179884 ~ 33180083 (-)
G2130267 NA non-coding downstream 27589 33178880 ~ 33179177 (-)
G2130278 NA non-coding upstream 4250 33213368 ~ 33213796 (-)
G2130286 NA non-coding upstream 18040 33227158 ~ 33255976 (-)
G2130288 NA non-coding upstream 20843 33229961 ~ 33230382 (-)
G2130295 NA non-coding upstream 29904 33239022 ~ 33239346 (-)
G2130264 NA non-coding upstream 52527 33261645 ~ 33267195 (-)
LOC110508997 NA other downstream 976552 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1041744 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1178208 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1323626 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1469274 31708667 ~ 31761665 (-)
G2130393 NA other upstream 189429 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 831088 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 832320 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 832451 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1276751 34485869 ~ 34486176 (-)

Expression


Co-expression Network