G2130263


Basic Information

Item Value
gene id G2130263
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33272894 ~ 33274755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2435745
TACATTTAACACCTCTTAAGTAATTTATTAGAACAGGGATGTTTGCAGAGAAGTCTACCGTCAAGTGGCTCAAACAGTCCTACAAAAGGCTTGCGCCAGTCACCTGTGTCAGTGCATTACCAGCAAGTCTTTCCAGAGCACTGTAATATAAAGCTTTCAGTCACTTACAATATTCCCCGTAAATGTACCTCTTCCCCAACCCAAATGTGtgaagcacaggaggttggtgacagcTTGAGGagaacgggctcatggtaatgactggagcggaatcagtggaattaaATACATCTAACtgatggtttccatgtgttttatGCCATTCCATTAGTTCCGCTCCAGCAGTTATTAGGGGCCGTTGTCCCATCCGGTGGTGTGAAGTATACCCACTTTGGTCAAATAAATCCTCTACTGGAAATGCTAGACACAGATGACTATACGCAAGGTTAGCAGTCATACATTCTGTAGCACTCGATTTGCTCCACATTGAACGGACCATTTCTTTCAGACAAATTATGCAGTAGTGCTgctgtagtaataataataataataataataataataataataataacaacaacaataatagaACAGTAACAGCAAAGATGATCAAcgagggaaaaaaataaaaataaacaagttTCAGAGTACTGGTGCTGATGGAAACAAGATATGTGCACAGTCGACCATCTTCCCTAGTATGAAACAACTATGTTCTCAGAAATAACACCTACTTCAGGCAAAAGAGAGCTGCTTTTGAACTTGTGGTCAAGTGCCCGGAAGATGACAGGGGAATTCTTTAAGTTCTTAAAGTAACTATTGTTCACGTTCACAGTGAACCCAATCAATttcgcatgcatgcacgcacacacacacaaagatttgGTCACGcaaaaaaatacaatatattcGTATAGTGGTCCTATGGTTACTAGTAGTAAAGCCTGGACGACCTTCAAGGACCAGCCTAGAAATACATTTGGACCCTGGCTGCCCTGAAGACACAGGCAGTTAAGGACCAGGGACATGAACCACTGGTCGAGAAAAATAAGAGCAACAGGAAAATAAAGGAAATTCACTTTCACTGCATGACAAGCAGAAGAATATTAAGCTCAAGGGGTCACTAGAATACAGGTACATTTTTAAAACACAGTAAAAGATTTAGTACAAAGGTACTCAAATGTATTGAGTTTAACATCAGAGTAATACATGACTTAAAAGTCAccctttcaaaataaaagcttgtCTAAGATGACCCCAAAATATTCAGATAAAGTCATGAGGAAAAGCCAGCCAAAGCCTCGgggttaaaacacacacacacacacacactgaaatgcaTTTTTTCAAGCagcaatacaaaaaaaatatccaTGAAGTATGCATAATATCTGAAGAaaataaacatactgtatgaaaACATCCCTGCTATCATGTCTCTAAATACAAAACTTTTACCAATAATTTGCTTCAGTTCAACAAGAGATGTCCATTTTCcgcttttttttgtattttatctgTCATTTTAAAAACAGGTTAAAATTTCAGTCCTTAGGTGTGATGACAGTCTTTTTTTTCTCGTATACTTGAAGAAGTTGTAAGCATGCAAGCCTCGTAGAGGAGGGGCCCGGAGGGGCGGGGCTAATGCCCGGAGGGGCTGATGGGGCGGGCTGGTAGTGGTGCTAGAGTATTAAGCCAGGGCTGGGAAGGCCTCTGGGTCGTCAACGTTGGGAACGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2435745 True 1738 lncRNA 0.40 2 33272894 33274755

Neighbor

gene id symbol gene type direction distance location
LOC118944830 NA coding downstream 119480 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 299026 32968949 ~ 32973868 (-)
LOC110508225 LOC106598102 coding downstream 308742 32962496 ~ 32964152 (-)
rgs1 rgs1 coding downstream 315588 32954950 ~ 32957306 (-)
LOC110509023 LOC106598560 coding downstream 324382 32944542 ~ 32948512 (-)
LOC110508227 LOC106598474 coding upstream 3799 33278554 ~ 33307293 (-)
dynlt5 tctex1d1 coding upstream 35248 33310003 ~ 33313291 (-)
LOC110509030 LOC106598456 coding upstream 38678 33313433 ~ 33381200 (-)
LOC110509034 LOC106598452 coding upstream 131918 33406673 ~ 33514461 (-)
LOC110509036 LOC106598444 coding upstream 243949 33518704 ~ 33526697 (-)
G2130264 NA non-coding downstream 5699 33261645 ~ 33267195 (-)
G2130286 NA non-coding downstream 16918 33227158 ~ 33255976 (-)
G2130295 NA non-coding downstream 33548 33239022 ~ 33239346 (-)
G2130288 NA non-coding downstream 42512 33229961 ~ 33230382 (-)
G2130278 NA non-coding downstream 59098 33213368 ~ 33213796 (-)
G2130382 NA non-coding upstream 109050 33383805 ~ 33384077 (-)
G2130384 NA non-coding upstream 112773 33387528 ~ 33387751 (-)
G2130385 NA non-coding upstream 113277 33388032 ~ 33388359 (-)
G2130387 NA non-coding upstream 115277 33390032 ~ 33390255 (-)
G2130394 NA non-coding upstream 124980 33399735 ~ 33400010 (-)
LOC110508997 NA other downstream 1042680 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1107872 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1244336 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1389754 31882715 ~ 31883140 (-)
LOC110508968 LOC106598866 other downstream 1535402 31708667 ~ 31761665 (-)
G2130393 NA other upstream 123792 33398547 ~ 33399084 (-)
G2130771 LOC106598333 other upstream 765451 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 766683 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 766814 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1211114 34485869 ~ 34486176 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G312915 NA non-coding CI01000098 null 242153 ~ 245714 (+)