G2129639 (LOC106598496)



Basic Information


Item Value
gene id G2129639
gene name LOC106598496
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33308098 ~ 33308991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2434998
CAGAAACGGTGTGTATTGAATCAACAATCTACAGCATCTTGATCCACGGAGCCACCATGAAGTCCCAGTtgttctctctgctgctgctgtgtgtgctgtgtgtaagGGAGGTTCGATTGGAGGACGCTGCGACTGTGAGAGCTGTGCGGCTCTGTGGACGGGAGTTCCTGAGGGCCGTGGTGTACACCTGTGGAGGGTCAAGGTGGAGAAGGCTTCCAGTAGAGGACATAAATGGAAGGGTGGACCAGAATGGTCTGAAACCATGGGGGGCTGAGCCTGTGATGGACCAGAGACGACGAGACTTGAACGAAGCCCTGACCACCGTGTGCTGTCAACTGGGCTGTCGGAAGAGCGACCTTACAATCATGTGCTAGGGGCCAATGCGCAGGCATTGGCGACTTGGCGTTAATGTTTGTTGGAAAATAGTCCTTATTCAATATAGTTGTTTGGCTTCAATGGATGTCAGCTAAAGATATCATTACTTCCAAATACTTTCATTTACTTTTATCATGACTTTCAATGAAATTCCCCCATTGATCTTATCAGCAATAAAAACTGGACTTGTAACC

Function


NR:

description
relaxin-3-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2434998 True 569 TUCP 0.49 2 33308098 33308991

Neighbor


gene id symbol gene type direction distance location
LOC110509029 LOC106598504 coding upstream 33334 33248650 ~ 33274764 (+)
LOC118944857 LOC106568727 coding upstream 60836 33231522 ~ 33247262 (+)
LOC110508226 LOC106598614 coding upstream 95615 33176752 ~ 33212483 (+)
LOC110509026 LOC106598516 coding upstream 142384 33156641 ~ 33165714 (+)
LOC110509025 LOC106598617 coding upstream 181121 33124472 ~ 33126977 (+)
LOC118944861 NA coding downstream 204581 33513572 ~ 33520317 (+)
LOC110509035 LOC106598436 coding downstream 217693 33526684 ~ 33552442 (+)
LOC118944849 NA coding downstream 249291 33558282 ~ 33559552 (+)
LOC110509039 LOC106598420 coding downstream 274107 33583098 ~ 33616039 (+)
LOC110508288 LOC106598607 coding downstream 499029 33808020 ~ 33810797 (+)
G2129621 LOC106598474 non-coding upstream 19114 33287853 ~ 33288984 (+)
G2129606 NA non-coding upstream 46619 33261099 ~ 33261479 (+)
G2129565 NA non-coding upstream 93585 33214089 ~ 33214513 (+)
G2129564 NA non-coding upstream 94150 33212714 ~ 33213948 (+)
G2129642 NA non-coding downstream 4460 33313451 ~ 33316040 (+)
G2129665 LOC106598456 non-coding downstream 42902 33351893 ~ 33364858 (+)
G2129667 NA non-coding downstream 48006 33356997 ~ 33358347 (+)
G2129679 NA non-coding downstream 71175 33380166 ~ 33380705 (+)
G2129680 NA non-coding downstream 72208 33381199 ~ 33381433 (+)
LOC110509024 LOC106598521 other upstream 238928 33050612 ~ 33070407 (+)
zbtb41 zbtb41 other upstream 504176 32759166 ~ 32803922 (+)
G2129371 crb1 other upstream 558530 32748928 ~ 32749568 (+)
pfn2l LOC106598797 other upstream 607254 32631289 ~ 32700844 (+)
G2128753 NA other upstream 1033718 32269318 ~ 32274380 (+)
G2129708 NA other downstream 122760 33431751 ~ 33432107 (+)
G2129724 LOC106598452 other downstream 143221 33452212 ~ 33452873 (+)
G2129765 LOC106598425 other downstream 263117 33572108 ~ 33575970 (+)
G2129859 NA other downstream 420157 33729148 ~ 33729528 (+)
G2130731 NA other downstream 698640 34007631 ~ 34008262 (+)

Expression



Co-expression Network