G2130404



Basic Information


Item Value
gene id G2130404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33426418 ~ 33426855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2435899
agtgcatatttatatccaaaaatctaattttacctTGGCgtattatgttcagtagttccaaaacatgcagtgattttgcagagagccacaggaatttacagaaatactcattataaatgttgatgataattcaagtgttatgcatggaactttacatacacttctccttaatgcaaatgctgtgtcagatttcaaaaaaactttacgatGGAACgatggaacgagagctacctctcatgtgaatgtGCGTGACTGAGATCGAGGctgctgccagacctctgactcaatcccctctcatccggccccccttcacagtagaagcctgaaacaacgttctaaagacggttgacatctagtggaagccttaggaagtgcaaaattacccatatcccactgtgaattcgatAGGGGCtcagttcaaaaactacaaacctcaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2435899 True 438 lncRNA 0.41 1 33426418 33426855

Neighbor


gene id symbol gene type direction distance location
LOC110509030 LOC106598456 coding downstream 45218 33313433 ~ 33381200 (-)
dynlt5 tctex1d1 coding downstream 113127 33310003 ~ 33313291 (-)
LOC110508227 LOC106598474 coding downstream 119125 33278554 ~ 33307293 (-)
LOC118944830 NA coding downstream 273004 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 452550 32968949 ~ 32973868 (-)
LOC110509036 LOC106598444 coding upstream 91849 33518704 ~ 33526697 (-)
LOC110509037 LOC106598611 coding upstream 128162 33555017 ~ 33562140 (-)
LOC110508228 NA coding upstream 137080 33563935 ~ 33568603 (-)
LOC110509038 LOC106598425 coding upstream 145255 33572110 ~ 33575991 (-)
trnav-cac-89 NA coding upstream 155705 33582560 ~ 33582632 (-)
G2130398 NA non-coding downstream 13055 33412968 ~ 33413363 (-)
G2130394 NA non-coding downstream 26408 33399735 ~ 33400010 (-)
G2130387 NA non-coding downstream 36163 33390032 ~ 33390255 (-)
G2130385 NA non-coding downstream 38059 33388032 ~ 33388359 (-)
G2130384 NA non-coding downstream 38667 33387528 ~ 33387751 (-)
G2130409 NA non-coding upstream 5900 33432755 ~ 33433053 (-)
LOC110509034 LOC106598452 non-coding upstream 13547 33406673 ~ 33514461 (-)
G2130462 NA non-coding upstream 126028 33552883 ~ 33554094 (-)
G2130476 NA non-coding upstream 150937 33577792 ~ 33578201 (-)
G2130484 NA non-coding upstream 166859 33593714 ~ 33594568 (-)
G2130393 NA other downstream 27334 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1196204 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1261396 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1397860 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1543278 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 613351 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 614583 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 614714 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1059014 34485869 ~ 34486176 (-)
G2131641 NA other upstream 1089667 34516522 ~ 34518129 (-)

Expression



Co-expression Network