G2130409



Basic Information


Item Value
gene id G2130409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33432755 ~ 33433053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2435904
cacagattttctatagggttgaggtcatggctttgtgatggccactccaatacattgactttgttgtacttaagccattttgccacaactttggaagtatgcttggggtcattgtccagttggaagacccatttgcgaccaagctttaacttcctgactgatgtcttgcgatgttgcttcaatatatccacataatttcccttctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcaccccacaacatgatgctgccacccctgtgctttacggttggga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2435904 True 299 lncRNA 0.45 1 33432755 33433053

Neighbor


gene id symbol gene type direction distance location
LOC110509030 LOC106598456 coding downstream 51555 33313433 ~ 33381200 (-)
dynlt5 tctex1d1 coding downstream 119464 33310003 ~ 33313291 (-)
LOC110508227 LOC106598474 coding downstream 125462 33278554 ~ 33307293 (-)
LOC118944830 NA coding downstream 279341 33150005 ~ 33153414 (-)
rgs18 rgs18 coding downstream 458887 32968949 ~ 32973868 (-)
LOC110509036 LOC106598444 coding upstream 85651 33518704 ~ 33526697 (-)
LOC110509037 LOC106598611 coding upstream 121964 33555017 ~ 33562140 (-)
LOC110508228 NA coding upstream 130882 33563935 ~ 33568603 (-)
LOC110509038 LOC106598425 coding upstream 139057 33572110 ~ 33575991 (-)
trnav-cac-89 NA coding upstream 149507 33582560 ~ 33582632 (-)
G2130404 NA non-coding downstream 5900 33426418 ~ 33426855 (-)
G2130398 NA non-coding downstream 19392 33412968 ~ 33413363 (-)
G2130394 NA non-coding downstream 32745 33399735 ~ 33400010 (-)
G2130387 NA non-coding downstream 42500 33390032 ~ 33390255 (-)
G2130385 NA non-coding downstream 44396 33388032 ~ 33388359 (-)
LOC110509034 LOC106598452 non-coding upstream 7349 33406673 ~ 33514461 (-)
G2130462 NA non-coding upstream 119830 33552883 ~ 33554094 (-)
G2130476 NA non-coding upstream 144739 33577792 ~ 33578201 (-)
G2130484 NA non-coding upstream 160661 33593714 ~ 33594568 (-)
G2130506 NA non-coding upstream 198780 33631833 ~ 33632058 (-)
G2130393 NA other downstream 33671 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1202541 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1267733 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1404197 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1549615 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 607153 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 608385 34041438 ~ 34068073 (-)
LOC110509052 LOC106598333 other upstream 608516 34038788 ~ 34058344 (-)
G2131621 NA other upstream 1052816 34485869 ~ 34486176 (-)
G2131641 NA other upstream 1083469 34516522 ~ 34518129 (-)

Expression



Co-expression Network