G2130506



Basic Information


Item Value
gene id G2130506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 33631833 ~ 33632058 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2436016
CCCTGTCCCAGGGGTCCTGAgaggtaacacagccctgtccCAGGGGTCCTAAGGGGTAACACAGCCCTGTCCCAGGGGTCCTGAGAGGTAACAGCCCTGTCCCAGGGGTCCTAAGGGGTAACACAGCCCTGTCCCAGGGGTCCTgaggggtaacacagccctgtcccaggggtcctgagaggtaacacagccctgtcccaggggtcatgaggggtaacacagccct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2436016 True 226 lncRNA 0.63 1 33631833 33632058

Neighbor


gene id symbol gene type direction distance location
trnav-cac-89 NA coding downstream 49201 33582560 ~ 33582632 (-)
LOC110509038 LOC106598425 coding downstream 55842 33572110 ~ 33575991 (-)
LOC110508228 NA coding downstream 63230 33563935 ~ 33568603 (-)
LOC110509037 LOC106598611 coding downstream 69693 33555017 ~ 33562140 (-)
LOC110509036 LOC106598444 coding downstream 105136 33518704 ~ 33526697 (-)
LOC118944832 LOC106598084 coding upstream 282292 33914350 ~ 33916205 (-)
LOC110509043 LOC106598366 coding upstream 321639 33953697 ~ 33972737 (-)
LOC110509045 LOC106598354 coding upstream 345518 33977576 ~ 33990790 (-)
LOC110509046 LOC106598598 coding upstream 365033 33997091 ~ 34000856 (-)
LOC110509052 LOC106598333 coding upstream 406730 34038788 ~ 34058344 (-)
G2130484 NA non-coding downstream 37265 33593714 ~ 33594568 (-)
G2130476 NA non-coding downstream 53632 33577792 ~ 33578201 (-)
G2130462 NA non-coding downstream 77739 33552883 ~ 33554094 (-)
LOC110509034 LOC106598452 non-coding downstream 181290 33406673 ~ 33514461 (-)
G2130409 NA non-coding downstream 198780 33432755 ~ 33433053 (-)
G2130508 NA non-coding upstream 3505 33635563 ~ 33635926 (-)
G2130514 NA non-coding upstream 17418 33649476 ~ 33649702 (-)
G2130519 NA non-coding upstream 25318 33657376 ~ 33657608 (-)
G2130528 NA non-coding upstream 41343 33673401 ~ 33674141 (-)
G2130532 NA non-coding upstream 46836 33678894 ~ 33679171 (-)
G2130393 NA other downstream 232749 33398547 ~ 33399084 (-)
LOC110508997 NA other downstream 1401619 32228406 ~ 32230258 (-)
asip2b agrp2 other downstream 1466811 32062049 ~ 32187519 (-)
LOC110508982 NA other downstream 1603275 32023057 ~ 32029225 (-)
G2128568 NA other downstream 1748693 31882715 ~ 31883140 (-)
G2130771 LOC106598333 other upstream 408148 34040206 ~ 34066665 (-)
G2130780 LOC106598333 other upstream 409380 34041438 ~ 34068073 (-)
G2131621 NA other upstream 853811 34485869 ~ 34486176 (-)
G2131641 NA other upstream 884464 34516522 ~ 34518129 (-)

Expression



Co-expression Network