Gene
RNA
| Item | Value |
|---|---|
| gene id | G2129853 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33719463 ~ 33719772 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2435279 | True | 310 | lncRNA | 0.45 | 1 | 33719463 | 33719772 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509039 | LOC106598420 | coding | upstream | 103424 | 33583098 ~ 33616039 (+) |
| LOC118944849 | NA | coding | upstream | 159911 | 33558282 ~ 33559552 (+) |
| LOC110509035 | LOC106598436 | coding | upstream | 167021 | 33526684 ~ 33552442 (+) |
| LOC118944861 | NA | coding | upstream | 200959 | 33513572 ~ 33520317 (+) |
| LOC110509029 | LOC106598504 | coding | upstream | 444699 | 33248650 ~ 33274764 (+) |
| LOC110508288 | LOC106598607 | coding | downstream | 88248 | 33808020 ~ 33810797 (+) |
| cfap57 | LOC106598390 | coding | downstream | 91841 | 33811613 ~ 33850430 (+) |
| LOC110509044 | LOC106598377 | coding | downstream | 208447 | 33928219 ~ 33938027 (+) |
| LOC110509047 | LOC106598344 | coding | downstream | 294123 | 34013895 ~ 34018374 (+) |
| LOC110509049 | LOC106598340 | coding | downstream | 310070 | 34029842 ~ 34035930 (+) |
| G2129848 | LOC106598404 | non-coding | upstream | 20921 | 33698050 ~ 33698542 (+) |
| G2129847 | NA | non-coding | upstream | 22131 | 33697093 ~ 33697332 (+) |
| G2129841 | NA | non-coding | upstream | 28949 | 33690163 ~ 33690514 (+) |
| G2129838 | NA | non-coding | upstream | 35651 | 33683438 ~ 33683812 (+) |
| G2129837 | NA | non-coding | upstream | 36118 | 33683072 ~ 33683345 (+) |
| G2129860 | NA | non-coding | downstream | 9921 | 33729693 ~ 33730731 (+) |
| G2129862 | NA | non-coding | downstream | 13532 | 33733304 ~ 33733514 (+) |
| G2129868 | NA | non-coding | downstream | 25710 | 33745482 ~ 33745693 (+) |
| G2129872 | NA | non-coding | downstream | 30223 | 33749995 ~ 33750401 (+) |
| G2129765 | LOC106598425 | other | upstream | 143493 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 266590 | 33452212 ~ 33452873 (+) |
| G2129708 | NA | other | upstream | 287356 | 33431751 ~ 33432107 (+) |
| G2129639 | LOC106598496 | other | upstream | 410472 | 33308098 ~ 33308991 (+) |
| LOC110509024 | LOC106598521 | other | upstream | 650293 | 33050612 ~ 33070407 (+) |
| G2129859 | NA | other | downstream | 9376 | 33729148 ~ 33729528 (+) |
| G2130731 | NA | other | downstream | 287859 | 34007631 ~ 34008262 (+) |
| G2130749 | LOC106598333 | other | downstream | 319020 | 34038792 ~ 34069094 (+) |
| LOC110508236 | LOC106598267 | other | downstream | 651089 | 34352592 ~ 34409491 (+) |
| G2131383 | NA | other | downstream | 883713 | 34603485 ~ 34604953 (+) |
