Gene
RNA
| Item | Value |
|---|---|
| gene id | G2129859 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 33729148 ~ 33729528 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2435288 | True | 381 | TUCP | 0.46 | 1 | 33729148 | 33729528 |
33,728,400
33,728,800
33,729,200
33,729,600
33,730,000
33,730,400
33,730,800
33,731,200
33,731,600
33,732,000
33,732,400
33,732,800
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509039 | LOC106598420 | coding | upstream | 113109 | 33583098 ~ 33616039 (+) |
| LOC118944849 | NA | coding | upstream | 169596 | 33558282 ~ 33559552 (+) |
| LOC110509035 | LOC106598436 | coding | upstream | 176706 | 33526684 ~ 33552442 (+) |
| LOC118944861 | NA | coding | upstream | 210644 | 33513572 ~ 33520317 (+) |
| LOC110509029 | LOC106598504 | coding | upstream | 454384 | 33248650 ~ 33274764 (+) |
| LOC110508288 | LOC106598607 | coding | downstream | 78492 | 33808020 ~ 33810797 (+) |
| cfap57 | LOC106598390 | coding | downstream | 82085 | 33811613 ~ 33850430 (+) |
| LOC110509044 | LOC106598377 | coding | downstream | 198691 | 33928219 ~ 33938027 (+) |
| LOC110509047 | LOC106598344 | coding | downstream | 284367 | 34013895 ~ 34018374 (+) |
| LOC110509049 | LOC106598340 | coding | downstream | 300314 | 34029842 ~ 34035930 (+) |
| G2129853 | NA | non-coding | upstream | 9376 | 33719463 ~ 33719772 (+) |
| G2129848 | LOC106598404 | non-coding | upstream | 30606 | 33698050 ~ 33698542 (+) |
| G2129847 | NA | non-coding | upstream | 31816 | 33697093 ~ 33697332 (+) |
| G2129841 | NA | non-coding | upstream | 38634 | 33690163 ~ 33690514 (+) |
| G2129838 | NA | non-coding | upstream | 45336 | 33683438 ~ 33683812 (+) |
| G2129860 | NA | non-coding | downstream | 165 | 33729693 ~ 33730731 (+) |
| G2129862 | NA | non-coding | downstream | 3776 | 33733304 ~ 33733514 (+) |
| G2129868 | NA | non-coding | downstream | 15954 | 33745482 ~ 33745693 (+) |
| G2129872 | NA | non-coding | downstream | 20467 | 33749995 ~ 33750401 (+) |
| G2129765 | LOC106598425 | other | upstream | 153178 | 33572108 ~ 33575970 (+) |
| G2129724 | LOC106598452 | other | upstream | 276275 | 33452212 ~ 33452873 (+) |
| G2129708 | NA | other | upstream | 297041 | 33431751 ~ 33432107 (+) |
| G2129639 | LOC106598496 | other | upstream | 420157 | 33308098 ~ 33308991 (+) |
| LOC110509024 | LOC106598521 | other | upstream | 659978 | 33050612 ~ 33070407 (+) |
| G2130731 | NA | other | downstream | 278103 | 34007631 ~ 34008262 (+) |
| G2130749 | LOC106598333 | other | downstream | 309264 | 34038792 ~ 34069094 (+) |
| LOC110508236 | LOC106598267 | other | downstream | 641333 | 34352592 ~ 34409491 (+) |
| G2131383 | NA | other | downstream | 873957 | 34603485 ~ 34604953 (+) |
| G2131416 | NA | other | downstream | 957743 | 34687271 ~ 34687640 (+) |
